RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 ZCCHC7Q8N3Z6 543 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 ACOT4Q8N9L9 421 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 OR7A2PQ8NGA2 310 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 OR8K5Q8NH50 307 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 IFI44Q8TCB0 444 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 LZICQ8WZA0 190 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ROPN1LQ96C74 230 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 TM4SF18Q96CE8 201 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 SMIM10Q96HG1 83 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 NUDT22Q9BRQ3 303 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 NLNQ9BYT8 704 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 TRIM4Q9C037 500 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 LRRN3Q9H3W5 708 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 REEP4Q9H6H4 257 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ATXN7L1Q9ULK2 861 aaPredicted RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 PLCL2Q9UPR0 1127 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 EXO1Q9UQ84 846 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 HEATR5BQ9P2D3 2071 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 A0A1W2PQM1 296 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 DPPA5A6NC42 116 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 TTC36A6NLP5 189 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 A8MU76 341 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 TXNDC9O14530 226 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 CDX4O14627 284 aaPredicted RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 FLRT2O43155 660 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 CPNE6O95741 557 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 LDOC1O95751 146 aaPredicted RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 B3GALT4O96024 378 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 RPLP0P05388 317 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 CTSBP07858 339 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 FAM58BPP0C7Q3 252 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 PIM1P11309 404 aaPredicted RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 PGM1P36871 562 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 RPL3P39023 403 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 KIR3DL1P43629 444 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 GABRA4P48169 554 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ARL4DP49703 201 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 SEPHS1P49903 392 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 TRA2BP62995 288 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 SNRPNP63162 240 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 PHC1P78364 1004 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 BTN3A2P78410 334 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 HSD11B2P80365 405 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 MC1RQ01726 317 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 SLAMF1Q13291 335 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 SLC9A5Q14940 896 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ARHGAP22Q7Z5H3 698 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 R3HCC1LQ7Z5L2 792 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 GPR180Q86V85 440 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 PGAM4Q8N0Y7 254 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 DPP10Q8N608 796 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 OR8J2Q8NGG1 315 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ZCCHC10Q8TBK6 192 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 RHBDD1Q8TEB9 315 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 DNAJC9Q8WXX5 260 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 UTP4Q969X6 686 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 MCUR1Q96AQ8 359 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 OR52E6Q96RD3 313 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 PRPF18Q99633 342 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 ROGDIQ9GZN7 287 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 COPS7BQ9H9Q2 264 aaPredicted RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 WDR41Q9HAD4 459 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 STARD5Q9NSY2 213 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 GID8Q9NWU2 228 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ATP6V1HQ9UI12 483 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 CROTQ9UKG9 612 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 ZNF318Q5VUA4 2279 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 CABIN1Q9Y6J0 2220 aa10.66□□□□□ -0.7
USP3-218ENST00000560202 SNRNP200O75643 2136 aaKnown RBP10.66□□□□□ -0.7
USP3-218ENST00000560202 TOX3O15405 576 aaPredicted RBP10.65□□□□□ -0.7
USP3-218ENST00000560202 SCELO95171 688 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 FURINP09958 794 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 LAMP1P11279 417 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 ALOX12P18054 663 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 CERS1P27544 350 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 MTTPP55157 894 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 SLC14A1Q13336 389 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 PDE7AQ13946 482 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 NFYCQ13952 458 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 HEPACAMQ14CZ8 416 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 MAPKAPK3Q16644 382 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 PRTGQ2VWP7 1150 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 CPTPQ5TA50 214 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 OR4F3Q6IEY1 312 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 MRM1Q6IN84 353 aaKnown RBP10.65□□□□□ -0.7
USP3-218ENST00000560202 ANKRD26P1Q6NSI1 321 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 ZNF574Q6ZN55 896 aaPredicted RBP10.65□□□□□ -0.7
USP3-218ENST00000560202 MSANTD1Q6ZTZ1 278 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 TMPRSS9Q7Z410 1059 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 CAMKMTQ7Z624 323 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 KMT5CQ86Y97 462 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 KLHL6Q8WZ60 621 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 COQ8BQ96D53 544 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 MTERF3Q96E29 417 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 SLC41A2Q96JW4 573 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 CNDP2Q96KP4 475 aaKnown RBP10.65□□□□□ -0.7
USP3-218ENST00000560202 ZNF285Q96NJ3 590 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 THTPAQ9BU02 230 aa10.65□□□□□ -0.7
USP3-218ENST00000560202 VCX3BQ9H321 246 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms