RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SPACA6W5XKT8 324 aa16■□□□□ 0.15
SNX1-203ENST00000558040 CUL9Q8IWT3 2517 aa16■□□□□ 0.15
SNX1-203ENST00000558040 ADAMTS20P59510 1910 aa16■□□□□ 0.15
SNX1-203ENST00000558040 MUC6Q6W4X9 2439 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 LOC100653049A0A140TA62 436 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 ERICH4A6NGS2 130 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 CCDC154A6NI56 674 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 H3BMH7 237 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 ANGPT2O15123 496 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 SCAMP2O15127 329 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 CFLARO15519 480 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 AKAP10O43572 662 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 KRT34O76011 436 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 KLHL18O94889 574 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 IL3P08700 152 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 COX7A2P14406 83 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 DRD2P14416 443 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 IL1RNP18510 177 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 CSRP1P21291 193 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 AVPR1BP47901 424 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 PDX1P52945 283 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 INSM1Q01101 510 aaPredicted RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 SRSF11Q05519 484 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 FOXM1Q08050 763 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 C2orf80Q0P641 193 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 MMEL1Q495T6 779 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 MRM1Q6IN84 353 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 FAM71E1Q6IPT2 247 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 RIMKLAQ8IXN7 391 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 KRTCAP2Q8N6L1 136 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 POU5F2Q8N7G0 328 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.99■□□□□ 0.151e-7■■□□□ 14.4
SNX1-203ENST00000558040 GFM2Q969S9 779 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 TM4SF18Q96CE8 201 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 SPDL1Q96EA4 605 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 MVB12AQ96EY5 273 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 CMKLR1Q99788 373 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 REEP4Q9H6H4 257 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 CLK4Q9HAZ1 481 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 LYRM4Q9HD34 91 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 MIEF1Q9NQG6 463 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 CUTCQ9NTM9 273 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 ATAD3AQ9NVI7 634 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 MS4A12Q9NXJ0 267 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 SRPK3Q9UPE1 567 aa15.99■□□□□ 0.15
SNX1-203ENST00000558040 MRPS2Q9Y399 296 aaKnown RBP15.99■□□□□ 0.15
SNX1-203ENST00000558040 EFCAB7A8K855 629 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 UNC5CO95185 931 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 NSA2O95478 260 aaKnown RBP15.98■□□□□ 0.15
SNX1-203ENST00000558040 B3GALT4O96024 378 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 IL12AP29459 219 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 S100A3P33764 101 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 BUD31P41223 144 aaPredicted RBP15.98■□□□□ 0.15
SNX1-203ENST00000558040 RASSF2P50749 326 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 DNAH14Q0VDD8 3507 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 IL11RAQ14626 422 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 C16orf72Q14CZ0 275 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 FAM174BQ3ZCQ3 159 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 CDCP2Q5VXM1 449 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 GPR180Q86V85 440 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 EFCAB3Q8N7B9 438 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 AMER3Q8N944 861 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 PPCDCQ96CD2 204 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 DEPDC7Q96QD5 511 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 SLC7A5P2Q9GIP4 190 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 WDR41Q9HAD4 459 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 TOR4AQ9NXH8 423 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 ATP6V1HQ9UI12 483 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 FBXW2Q9UKT8 454 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 CDC14AQ9UNH5 594 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 NDUFAF1Q9Y375 327 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 ASB4Q9Y574 426 aa15.98■□□□□ 0.15
SNX1-203ENST00000558040 A0A1W2PP18 115 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 C9JVG2 144 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 H0YIG0 161 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 FURINP09958 794 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 DDCP20711 480 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 TLX1P31314 330 aaPredicted RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 KIR3DL1P43629 444 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 ZFP36L2P47974 494 aaKnown RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 HNRNPH2P55795 449 aaKnown RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 PDE7AQ13946 482 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 PGS1Q32NB8 556 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 VPS26BQ4G0F5 336 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 TIGD2Q4W5G0 525 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 LACTB2Q53H82 288 aaPredicted RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 COQ5Q5HYK3 327 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 SPANXN4Q5MJ08 99 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 CPTPQ5TA50 214 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 NDUFAF5Q5TEU4 345 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 MSANTD1Q6ZTZ1 278 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 CAMKMTQ7Z624 323 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 PPP1R3BQ86XI6 285 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 PDSS2Q86YH6 399 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 PCYOX1LQ8NBM8 494 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 OR9A4Q8NGU2 314 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 ADAMTS18Q8TE60 1221 aa15.97■□□□□ 0.15
SNX1-203ENST00000558040 ZNF764Q96H86 408 aaPredicted RBP15.97■□□□□ 0.15
SNX1-203ENST00000558040 SLC45A3Q96JT2 553 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms