RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CNDP1Q96KN2 507 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 ATP6V1G3Q96LB4 118 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 SERINC2Q96SA4 455 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 SERPINI1Q99574 410 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 SH3GL2Q99962 352 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 CENPKQ9BS16 269 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 ZNF446Q9NWS9 450 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 SLC12A4Q9UP95 1085 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 FIS1Q9Y3D6 152 aa16.51■□□□□ 0.23
SHMT2-225ENST00000556798 CACNA1GO43497 2377 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 NPHS1O60500 1241 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 B4GALT2O60909 372 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 HEXBP07686 556 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 HIST1H1TP22492 207 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
SHMT2-225ENST00000556798 SERPINB3P29508 390 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ARRB2P32121 409 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 EMP2P54851 167 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 CUL3Q13618 768 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ATP1A4Q13733 1029 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 RCN2Q14257 317 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ABRAXAS2Q15018 415 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 CHI3L2Q15782 390 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 AP5B1Q2VPB7 878 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ARL13AQ5H913 290 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-225ENST00000556798 C10orf62Q5T681 223 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-225ENST00000556798 HHATQ5VTY9 493 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 CES4AQ5XG92 561 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 OR4C11Q6IEV9 310 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ATG14Q6ZNE5 492 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 GOLGA6L1Q8N7Z2 621 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ACOT4Q8N9L9 421 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 PPP1R14CQ8TAE6 165 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 TBC1D20Q96BZ9 403 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 ZNF717Q9BY31 904 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-225ENST00000556798 LANCL2Q9NS86 450 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 MKL2Q9ULH7 1088 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 PPT2Q9UMR5 302 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 LHX6Q9UPM6 363 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 POLHQ9Y253 713 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 MAN2B2Q9Y2E5 1009 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 HS3ST3B1Q9Y662 390 aa16.5■□□□□ 0.23
SHMT2-225ENST00000556798 FAM227AF5H4B4 570 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 ULK1O75385 1050 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 RECKO95980 971 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 FHP07954 510 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 RNH1P13489 461 aaKnown RBP16.49■□□□□ 0.23
SHMT2-225ENST00000556798 CHN1P15882 459 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 BGNP21810 368 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 MMP11P24347 488 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 LIM2P55344 173 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 WDR4P57081 412 aaKnown RBP16.49■□□□□ 0.23
SHMT2-225ENST00000556798 CPZQ66K79 652 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 FAM47BQ8NA70 645 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 OR6Y1Q8NGX8 325 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 AGR3Q8TD06 166 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 EXTL1Q92935 676 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 DOCK10Q96BY6 2186 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 C8orf44Q96CB5 159 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 OR1F2PQ96R84 312 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 CSF3RQ99062 836 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 TRMOQ9BU70 441 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 NPLQ9BXD5 320 aaPredicted RBP16.49■□□□□ 0.23
SHMT2-225ENST00000556798 MRPL1Q9BYD6 325 aaKnown RBP16.49■□□□□ 0.23
SHMT2-225ENST00000556798 ROGDIQ9GZN7 287 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 VN1R1Q9GZP7 353 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 SEMA3GQ9NS98 782 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 PSD3Q9NYI0 1048 aa16.49■□□□□ 0.23
SHMT2-225ENST00000556798 ARGFXA6NJG6 315 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 TMEM233B4DJY2 109 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 H3BQF6 201 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 MASP2O00187 686 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 PSMD12O00232 456 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-225ENST00000556798 SOCS6O14544 535 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 BIRC5O15392 142 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 ALOX12BO75342 701 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 EEDO75530 441 aaKnown RBP16.48■□□□□ 0.23
SHMT2-225ENST00000556798 LYPLA1O75608 230 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-225ENST00000556798 SEMA3DO95025 777 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 SCELO95171 688 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 GBAP04062 536 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 NEFHP12036 1026 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 BSGP35613 385 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 RAB38P57729 211 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 HMGCS1Q01581 520 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 EEF1A2Q05639 463 aaKnown RBP16.48■□□□□ 0.23
SHMT2-225ENST00000556798 CHAF1BQ13112 559 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 TBR1Q16650 682 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 THAP4Q8WY91 577 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 TSLPQ969D9 159 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 CATSPER2Q96P56 530 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 MAPKAP1Q9BPZ7 522 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 ACPTQ9BZG2 426 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 ZNF395Q9H8N7 513 aaPredicted RBP16.48■□□□□ 0.23
SHMT2-225ENST00000556798 BRF2Q9HAW0 419 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 CLK4Q9HAZ1 481 aaKnown RBP16.48■□□□□ 0.23
SHMT2-225ENST00000556798 P4HTMQ9NXG6 502 aa16.48■□□□□ 0.23
SHMT2-225ENST00000556798 NKIRAS1Q9NYS0 192 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms