RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 UGDHO60701 494 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 ALBP02768 609 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 BCKDHAP12694 445 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 CYP2A7P20853 494 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 SLC6A12P48065 614 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 MTPNP58546 118 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 DAB2P98082 770 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 DAG1Q14118 895 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 CCNYL2Q5T2Q4 361 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 UBE2R2Q712K3 238 aaPredicted RBP16.61■□□□□ 0.25
SHOX-204ENST00000554971 OR5AR1Q8NGP9 310 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 MAGEE2Q8TD90 523 aaPredicted RBP16.61■□□□□ 0.25
SHOX-204ENST00000554971 CCDC74AQ96AQ1 378 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 SDCCAG3Q96C92 435 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 VPS50Q96JG6 964 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 CDC6Q99741 560 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 THUMPD3Q9BV44 507 aaKnown RBP16.61■□□□□ 0.25
SHOX-204ENST00000554971 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.61■□□□□ 0.25
SHOX-204ENST00000554971 NEUROG3Q9Y4Z2 214 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 PCDHGA11Q9Y5H2 935 aa16.61■□□□□ 0.25
SHOX-204ENST00000554971 SPAARA0A1B0GVQ0 90 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 KRT87PA6NCN2 255 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 FAM220BPB1ANY3 271 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 FFAR3O14843 346 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 GPR42O15529 346 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 PRMT3O60678 531 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 ARSFP54793 590 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 SELPLGQ14242 412 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 GPR18Q14330 331 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 PTGR1Q14914 329 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 NR1D2Q14995 579 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 SLCO6A1Q86UG4 719 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 ZNF420Q8TAQ5 688 aaPredicted RBP16.6■□□□□ 0.25
SHOX-204ENST00000554971 IFI44Q8TCB0 444 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 MCOLN3Q8TDD5 553 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 ITCHQ96J02 903 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 OR52E6Q96RD3 313 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 TUBA1CQ9BQE3 449 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 NTN4Q9HB63 628 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 POT1Q9NUX5 634 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 DDX18Q9NVP1 670 aaKnown RBP16.6■□□□□ 0.25
SHOX-204ENST00000554971 DMXL2Q8TDJ6 3036 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 KCNE1BA0A087WTH5 132 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 KCNK5O95279 499 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 GNAO1P09471 354 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 CEACAM1P13688 526 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 SLC5A2P31639 672 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 MAPK9P45984 424 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 NOVA1P51513 510 aaKnown RBP16.6■□□□□ 0.25
SHOX-204ENST00000554971 HMGCS1Q01581 520 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 ABRQ12979 859 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 DPY19L1Q2PZI1 675 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 TTC23Q5W5X9 447 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 SLC9B2Q86UD5 537 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 ZDHHC13Q8IUH4 622 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 RASGRP3Q8IV61 690 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 MICU2Q8IYU8 434 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 TMEM132CQ8N3T6 1108 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 CXorf40BQ96DE9 158 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 HBEGFQ99075 208 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 OSBPL10Q9BXB5 764 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 ELOVL6Q9H5J4 265 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 USE1Q9NZ43 259 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 CFAP47Q6ZTR5 3102 aa16.6■□□□□ 0.25
SHOX-204ENST00000554971 UPK1AO00322 258 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 DKK1O94907 266 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 VIPP01282 170 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 S100A3P33764 101 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 SPANXN4Q5MJ08 99 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 ISLR2Q6UXK2 745 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 TMEM26Q6ZUK4 368 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 CALHM3Q86XJ0 350 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 OR5K2Q8NHB8 316 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 SELENOMQ8WWX9 145 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 JPH3Q8WXH2 748 aaPredicted RBP16.59■□□□□ 0.25
SHOX-204ENST00000554971 CCDC3Q9BQI4 270 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 ACPTQ9BZG2 426 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 KAT8Q9H7Z6 458 aaKnown RBP16.59■□□□□ 0.25
SHOX-204ENST00000554971 ADGRE2Q9UHX3 823 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 ASF1AQ9Y294 204 aa16.59■□□□□ 0.25
SHOX-204ENST00000554971 B4GAT1O43505 415 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 ALPLP05186 524 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 EPORP19235 508 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 HLCSP50747 726 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 NUP107P57740 925 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 OR1D5P58170 312 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 SIM1P81133 766 aaPredicted RBP16.58■□□□□ 0.25
SHOX-204ENST00000554971 PCDH1Q08174 1060 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 CCSMST1Q4G0I0 132 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 LIPJQ5W064 366 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 TRIM48Q8IWZ4 208 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 EID3Q8N140 333 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 OR10A6Q8NH74 314 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 SKA2Q8WVK7 121 aaPredicted RBP16.58■□□□□ 0.25
SHOX-204ENST00000554971 NAT6Q93015 286 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 MENTQ9BUN1 341 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 KIR3DX1Q9H7L2 352 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 FARSBQ9NSD9 589 aaKnown RBP16.58■□□□□ 0.25
SHOX-204ENST00000554971 DCAF13Q9NV06 445 aaKnown RBP16.58■□□□□ 0.25
SHOX-204ENST00000554971 DNAJC11Q9NVH1 559 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms