RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SLC30A4O14863 429 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 BCKDKO14874 412 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SHOXO15266 292 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PROM1O43490 865 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PTP4A3O75365 173 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 STK16O75716 305 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 INMTO95050 263 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TXNDC12O95881 172 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NAT2P11245 290 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LAG3P18627 525 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 DDCP20711 480 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ELAVL4P26378 380 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PKLRP30613 574 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LCN1P31025 176 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SSR1P43307 286 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RABIFP47224 123 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GLRBP48167 497 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GABRA4P48169 554 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RGS6P49758 472 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 BFSP2Q13515 415 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CAMK1Q14012 370 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PTPRCAPQ14761 206 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 HSPB2Q16082 182 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 DECR1Q16698 335 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 MANEAQ5SRI9 462 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C6orf132Q5T0Z8 1188 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZBTB37Q5TC79 503 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PLAG1Q6DJT9 500 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM214Q6NUQ4 689 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PGBD2Q6P3X8 592 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 BTLAQ7Z6A9 289 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ADGRG3Q86Y34 549 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 KIF18BQ86Y91 864 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NPAS3Q8IXF0 933 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TBC1D19Q8N5T2 526 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 EFCAB3Q8N7B9 438 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 BMPERQ8N8U9 685 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 VN1R2Q8NFZ6 395 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR4D11Q8NGI4 311 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ITFG1Q8TB96 612 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 DNAJA4Q8WW22 397 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 OR5P2Q8WZ92 322 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PIK3R3Q92569 461 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RAB7BQ96AH8 199 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TM4SF18Q96CE8 201 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF354BQ96LW1 612 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ACOX2Q99424 681 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GABRG3Q99928 467 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NUDT16L1Q9BRJ7 211 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ARHGAP9Q9BRR9 750 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TIMM29Q9BSF4 260 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LMF2Q9BU23 707 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NSUN3Q9H649 340 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 TRIM45Q9H8W5 580 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FBRSQ9HAH7 460 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZFYVE1Q9HBF4 777 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ACOXLQ9NUZ1 547 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 DNAJC11Q9NVH1 559 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PKD2L2Q9NZM6 624 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GIMAP2Q9UG22 337 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 MGAT4BQ9UQ53 548 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 NOD1Q9Y239 953 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CSNK1G3Q9Y6M4 447 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 THADAQ6YHU6 1953 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LOC100653049A0A140TA62 436 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C2orf92A0A1B0GVN3 265 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 IRGMA1A4Y4 181 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 BLACEA4D250 179 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 FAM221BA6H8Z2 402 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C2orf78A6NCI8 922 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 EFCAB10A6NFE3 127 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF860A6NHJ4 632 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CENPBD1B2RD01 187 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 HMGN4O00479 90 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 KPNA4O00629 521 aaPredicted RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ADAMDEC1O15204 470 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SRSF10O75494 262 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SNAPC5O75971 98 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 KRT34O76011 436 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 RHOBTB1O94844 696 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 SOX30O94993 753 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 UPP2O95045 317 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 MED26O95402 600 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 POP4O95707 220 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 GSNP06396 782 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 DRD2P14416 443 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 LMO1P25800 156 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PRKAR1BP31321 381 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 AHRP35869 848 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CDH15P55291 814 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 WDR5P61964 334 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PPARDQ03181 441 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 PRKCZQ05513 592 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CAPRIN1Q14444 709 aaKnown RBP3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CHRNA6Q15825 494 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 CYP51A1Q16850 503 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZSWIM7Q19AV6 140 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 C9orf64Q5T6V5 341 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 METRNLQ641Q3 311 aa3.28□□□□□ -1.88
SEC23A-207ENST00000554615 ZCCHC12Q6PEW1 402 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms