RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 LIN28AQ9H9Z2 209 aaKnown RBP3.47□□□□□ -1.85
PCNX4-206ENST00000553513 KCNMB3Q9NPA1 279 aa3.47□□□□□ -1.85
PCNX4-206ENST00000553513 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.47□□□□□ -1.85
PCNX4-206ENST00000553513 AATFQ9NY61 560 aaKnown RBP eCLIP3.47□□□□□ -1.85
PCNX4-206ENST00000553513 CLIP2Q9UDT6 1046 aa3.47□□□□□ -1.85
PCNX4-206ENST00000553513 FBXL4Q9UKA2 621 aa3.47□□□□□ -1.85
PCNX4-206ENST00000553513 MRTO4Q9UKD2 239 aaKnown RBP3.47□□□□□ -1.85
PCNX4-206ENST00000553513 ELF5Q9UKW6 265 aaPredicted RBP3.47□□□□□ -1.85
PCNX4-206ENST00000553513 RNF123Q5XPI4 1314 aa3.46□□□□□ -1.85
PCNX4-206ENST00000553513 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 TRBV4-1A0A0J9YWV2 114 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ZNF732B4DXR9 585 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SLC22A2O15244 555 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SOCS5O75159 536 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 PEX11AO75192 247 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 KRT33AO76009 404 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 PROS1P07225 676 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SP1P08047 785 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 HMBSP08397 361 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 TPBGLP0DKB5 382 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 GNSP15586 552 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ACP1P24666 158 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 HLA-FP30511 346 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 CLCN4P51793 760 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 HMGN5P82970 282 aaKnown RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SCGB2A2Q13296 93 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 GK2Q14410 553 aaPredicted RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 GRB14Q14449 540 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SPHARQ15513 63 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SLC25A53Q5H9E4 307 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 WDR38Q5JTN6 314 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ZNF776Q68DI1 518 aaPredicted RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 HIST2H2AA3Q6FI13 130 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 RTL6Q6ICC9 239 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ABRAXAS1Q6UWZ7 409 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 MEX3BQ6ZN04 569 aaKnown RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 IL17RELQ6ZVW7 336 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SLC26A9Q7LBE3 791 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 CPEB2Q7Z5Q1 589 aaKnown RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SMIM29Q86T20 159 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 PIGZQ86VD9 579 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 MARVELD2Q8N4S9 558 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 RAB42Q8N4Z0 105 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 KBTBD3Q8NAB2 608 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 GLYATL1Q969I3 302 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 NXPE2Q96DL1 559 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 GIMAP5Q96F15 307 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 COQ7Q99807 217 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SSX3Q99909 188 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 NTMT1Q9BV86 223 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 FUNDC2Q9BWH2 189 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 FTHL17Q9BXU8 183 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 WWTR1Q9GZV5 400 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 MMP28Q9H239 520 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 GANQ9H2C0 597 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ZDHHC6Q9H6R6 413 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 SDF2L1Q9HCN8 221 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 S100A14Q9HCY8 104 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 HPS4Q9NQG7 708 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 VPS54Q9P1Q0 977 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ZNF319Q9P2F9 582 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ANKMY1Q9P2S6 941 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 PSORS1C1Q9UIG5 152 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 ERRFI1Q9UJM3 462 aaPredicted RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 PILRBQ9UKJ0 227 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 POMT2Q9UKY4 750 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 PLEKHA6Q9Y2H5 1048 aa3.46□□□□□ -1.86
PCNX4-206ENST00000553513 MRPS2Q9Y399 296 aaKnown RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.46□□□□□ -1.86
PCNX4-206ENST00000553513 A0A087WUV0 522 aaPredicted RBP3.45□□□□□ -1.86
PCNX4-206ENST00000553513 FAM172BPA6NC97 362 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 TRMUO75648 421 aaKnown RBP3.45□□□□□ -1.86
PCNX4-206ENST00000553513 CDC123O75794 336 aaPredicted RBP3.45□□□□□ -1.86
PCNX4-206ENST00000553513 STBD1O95210 358 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 SYNGR4O95473 234 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 CXCL14O95715 111 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 PDGFBP01127 241 aaPredicted RBP3.45□□□□□ -1.86
PCNX4-206ENST00000553513 TNNI3P19429 210 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 ANOS1P23352 680 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 ACKR3P25106 362 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 RPA1P27694 616 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 DUTP33316 252 aaKnown RBP3.45□□□□□ -1.86
PCNX4-206ENST00000553513 ABCE1P61221 599 aaKnown RBP3.45□□□□□ -1.86
PCNX4-206ENST00000553513 HERV-K104P63124 156 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 PHEXP78562 749 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 SP3Q02447 781 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 GABPAQ06546 454 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 CNTN1Q12860 1018 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 TMEM132DQ14C87 1099 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 HEPACAMQ14CZ8 416 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 ZNF74Q16587 644 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 KRTAP27-1Q3LI81 207 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 GPAT3Q53EU6 434 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 MPPE1Q53F39 396 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 XKR3Q5GH77 459 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 LDLRAP1Q5SW96 308 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 ATP1A1-AS1Q5TC04 95 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 NKAIN2Q5VXU1 208 aa3.45□□□□□ -1.86
PCNX4-206ENST00000553513 OR4C11Q6IEV9 310 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms