RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SLCO2A1Q92959 643 aa21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 RUNDC3BQ96NL0 473 aa21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 DDX47Q9H0S4 455 aaKnown RBP21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 COPS7BQ9H9Q2 264 aaPredicted RBP21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 SLC24A3Q9HC58 644 aa21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 ADAP2Q9NPF8 381 aa21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 NSMCE4AQ9NXX6 385 aa21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 PPIEQ9UNP9 301 aaKnown RBP21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 CLCA3PQ9Y6N3 262 aa21.51■■□□□ 1.03
SMARCD1-209ENST00000550477 CDC7O00311 574 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 ERI3O43414 337 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 IFNA16P05015 189 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 CHRNB4P30926 498 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 RFC3P40938 356 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 ARL4CP56559 192 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 FRG1Q14331 258 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 HP1BP3Q5SSJ5 553 aaPredicted RBP21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 CDH24Q86UP0 819 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 IGDCC3Q8IVU1 814 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 SCUBE1Q8IWY4 988 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 KLHDC8AQ8IYD2 350 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 DAZLQ92904 295 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 NCLNQ969V3 563 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 NT5DC2Q9H857 520 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 CNOT10Q9H9A5 744 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 PRM3Q9NNZ6 103 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 KCNJ16Q9NPI9 418 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 SLC17A6Q9P2U8 582 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 SNX12Q9UMY4 172 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 CCDC168Q8NDH2 2452 aa21.5■■□□□ 1.03
SMARCD1-209ENST00000550477 NPEPPSL1A6NEC2 478 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 CLGNO14967 610 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 ZSCAN12O43309 604 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 CLEC3AO75596 197 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 PGGT1BP53609 377 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 GPR85P60893 370 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 MGAT5Q09328 741 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 EFTUD2Q15029 972 aaKnown RBP eCLIP21.49■■□□□ 1.031e-7■■■■■ 39.4
SMARCD1-209ENST00000550477 CMPK2Q5EBM0 449 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 ACAD11Q709F0 780 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 FGD2Q7Z6J4 655 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 SLC35F6Q8N357 371 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 TCAIMQ8N3R3 496 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 PSD4Q8NDX1 1056 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 GPRC5BQ9NZH0 403 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 KCMF1Q9P0J7 381 aa21.49■■□□□ 1.03
SMARCD1-209ENST00000550477 FAM95CA0A1B0GW59 222 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 LRIT2A6NDA9 550 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 PDE9AO76083 593 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 STX4Q12846 297 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 RUNX2Q13950 521 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 SLBPQ14493 270 aaKnown RBP eCLIP21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 ELAVL1Q15717 326 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 STEAP4Q687X5 459 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 TRMT10BQ6PF06 316 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 HSDL2Q6YN16 418 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 MDGA2Q7Z553 956 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 SLC22A16Q86VW1 577 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 ZC3HC1Q86WB0 502 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 LILRB4Q8NHJ6 448 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 MS4A6EQ96DS6 147 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 SERINC2Q96SA4 455 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 REXO4Q9GZR2 422 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 C2CD3Q4AC94 2353 aa21.48■■□□□ 1.03
SMARCD1-209ENST00000550477 A0A0G2JN53 185 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 TCP1P17987 556 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 TNNI3P19429 210 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 PLA2G16P53816 162 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 MTTPP55157 894 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 PPIAP62937 165 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 HIST2H2ACQ16777 129 aaPredicted RBP21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 HIST2H2AA3Q6FI13 130 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 IL20RBQ6UXL0 311 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 SLCO4C1Q6ZQN7 724 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 ACBD4Q8NC06 268 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 SRFBP1Q8NEF9 429 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 OR2L5Q8NG80 312 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 OR52N2Q8NGI0 321 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 KIAA1191Q96A73 305 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 RHBDF1Q96CC6 855 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 ROGDIQ9GZN7 287 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 DEFB127Q9H1M4 99 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 POPDC3Q9HBV1 291 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 PLSCR2Q9NRY7 297 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 MYOTQ9UBF9 498 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 IKZF3Q9UKT9 509 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 TEX264Q9Y6I9 313 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 SPACA6W5XKT8 324 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 PDZD2O15018 2839 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 OTOGQ6ZRI0 2925 aa21.47■■□□□ 1.03
SMARCD1-209ENST00000550477 CTAGE15A4D2H0 777 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 CTNSO60931 367 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 OR2J2O76002 312 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 TSNQ15631 228 aaKnown RBP21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 NDUFAF5Q5TEU4 345 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 GK5Q6ZS86 529 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 CTAGE6Q86UF2 777 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 FAM47BQ8NA70 645 aa21.46■■□□□ 1.03
SMARCD1-209ENST00000550477 MORN4Q8NDC4 146 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms