RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SLC25A30Q5SVS4 291 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GCNT6Q5T4J0 391 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 C1QTNF12Q5T7M4 302 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 STEAP3Q658P3 488 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 OR4F3Q6IEY1 312 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 FAM151BQ6UXP7 276 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 LINC00114Q6XXX2 140 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 C1orf229Q6ZS94 237 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF621Q6ZSS3 439 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 IKBIPQ70UQ0 350 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 AHSA2Q719I0 299 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SPATC1Q76KD6 591 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GALNT5Q7Z7M9 940 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PARP16Q8N5Y8 322 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PNPLA1Q8N8W4 532 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 DCBLD1Q8N8Z6 715 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SIMC1Q8NDZ2 872 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 OR10G2Q8NGC3 310 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 OR52N2Q8NGI0 321 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GRPEL2Q8TAA5 225 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 HCAR2Q8TDS4 363 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 APH1BQ8WW43 257 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ASZ1Q8WWH4 475 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 EDARADDQ8WWZ3 215 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 NR4A3Q92570 626 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 GGHQ92820 318 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 UBE2E3Q969T4 207 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ECHDC3Q96DC8 303 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 WDR34Q96EX3 536 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MYEOVQ96EZ4 313 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ALG14Q96F25 216 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SCRN2Q96FV2 425 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PLPPR2Q96GM1 343 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF486Q96H40 463 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ZNF764Q96H86 408 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CEP19Q96LK0 163 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 APOLD1Q96LR9 279 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 TSSK3Q96PN8 268 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 TEFMQ96QE5 360 aaKnown RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 COQ7Q99807 217 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SLX1AQ9BQ83 275 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 SLC30A2Q9BRI3 323 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 INPP5KQ9BT40 448 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 HERC2P3Q9BVR0 1158 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CDADC1Q9BWV3 514 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 RRAGCQ9HB90 399 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 BPIFA1Q9NP55 256 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ISYNA1Q9NPH2 558 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ASAH2Q9NR71 780 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ABCB10Q9NRK6 738 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ABCB8Q9NUT2 735 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 VPS51Q9UID3 782 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 LSM7Q9UK45 103 aaKnown RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ANGPT4Q9Y264 503 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 ITM2BQ9Y287 266 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PRG3Q9Y2Y8 225 aaPredicted RBP6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PCDHB7Q9Y5E2 793 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 PCDHGA2Q9Y5H1 932 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 U3KQV3 271 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MYO16Q9Y6X6 1858 aa6.21□□□□□ -1.42
SNHG1-225ENST00000545920 MGAT4DA6NG13 374 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SNTNA6NMZ2 147 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 IQCF5A8MTL0 148 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 TOR1BO14657 336 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 TBX19O60806 448 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PDE9AO76083 593 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SLCO2B1O94956 709 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CCNB2O95067 398 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 VNN2O95498 520 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 KLKB1P03952 638 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CATP04040 527 aaKnown RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 SCG5P05408 212 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 LCKP06239 509 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ADORA3P0DMS8 318 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CYP2A6P11509 494 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CKBP12277 381 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 HOXB4P17483 251 aaPredicted RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ATF6P18850 670 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CHMP24386 653 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 GADD45AP24522 165 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 ITGB7P26010 798 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 RRM2P31350 389 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 HNF1BP35680 557 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 LIPAP38571 399 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 LIMS1P48059 325 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 RUNX1T1Q06455 604 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PIGFQ07326 219 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 COX10Q12887 443 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 DUSP4Q13115 394 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CHIT1Q13231 466 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PLD1Q13393 1074 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 DNASE1L3Q13609 305 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 C1DQ13901 141 aaKnown RBP6.2□□□□□ -1.42
SNHG1-225ENST00000545920 PDE7AQ13946 482 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 DMC1Q14565 340 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 POU4F3Q15319 338 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 KCNA10Q16322 511 aa6.2□□□□□ -1.42
SNHG1-225ENST00000545920 CLPPQ16740 277 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms