RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 LHCGRP22888 699 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 PSMA1P25786 263 aaKnown RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 CTGFP29279 349 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 OR1E2P47887 323 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 SPINT3P49223 89 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 HBA1P69905 142 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 CDK6Q00534 326 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 SCN1BQ07699 218 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 PLD1Q13393 1074 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 COX20Q5RI15 118 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 MPP7Q5T2T1 576 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 NXNL2Q5VZ03 156 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 FRMPD2BQ6IN97 320 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 TAS1R1Q7RTX1 841 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 LAS2Q8IYD9 372 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.38□□□□□ -1.07
TDP1-204ENST00000545686 KLHL6Q8WZ60 621 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 VPS35Q96QK1 796 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ROGDIQ9GZN7 287 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 SLC22A4Q9H015 551 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 GPBP1L1Q9HC44 474 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 SH3BP4Q9P0V3 963 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 TMPRSS11EQ9UL52 423 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 GNG14A0A1W2PPG7 69 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ARHGEF33A8MVX0 844 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 A8MX80 341 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 UPK3BL1B0FP48 263 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 FAM25AB3EWG3 89 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 FAM25CB3EWG5 89 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 FAM25GB3EWG6 89 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 UPK3BL2E5RIL1 263 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 PCDH17O14917 1159 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 IFNW1P05000 195 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ADRA2AP08913 450 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 IL7P13232 177 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 CNR2P34972 360 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 OR1D2P34982 312 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 MLLT11Q13015 90 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 VEPH1Q14D04 833 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 NCF4Q15080 339 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ZNF79Q15937 498 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 TAF12Q16514 161 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 DGKKQ5KSL6 1271 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ANGPTL8Q6UXH0 198 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 VASH1Q7L8A9 365 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 TMEM173Q86WV6 379 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 GALNT12Q8IXK2 581 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 OR7G3Q8NG95 312 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 OR9Q1Q8NGQ5 310 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 OR56A3Q8NH54 315 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 HUS1BQ8NHY5 278 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 GRPEL2Q8TAA5 225 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 GPR151Q8TDV0 419 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ADAMTS19Q8TE59 1207 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 ELMO1Q92556 727 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 GTPBP3Q969Y2 492 aaKnown RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 KIAA1143Q96AT1 154 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 VOPP1Q96AW1 172 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 MTERF3Q96E29 417 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 TMEM80Q96HE8 168 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 DEPDC7Q96QD5 511 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 CPEB1Q9BZB8 566 aaKnown RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 BARHL1Q9BZE3 327 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 SUV39H2Q9H5I1 410 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 NMNAT1Q9HAN9 279 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 STOX2Q9P2F5 926 aaPredicted RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 GULP1Q9UBP9 304 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 EXO1Q9UQ84 846 aaKnown RBP8.38□□□□□ -1.07
TDP1-204ENST00000545686 CMAHPQ9Y471 501 aa8.38□□□□□ -1.07
TDP1-204ENST00000545686 MEIOCA2RUB1 952 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 M0R129 80 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 TLR4O00206 839 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 CACNB4O00305 520 aaPredicted RBP8.37□□□□□ -1.07
TDP1-204ENST00000545686 RGS5O15539 181 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 GPR37L1O60883 481 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 OLFM2O95897 454 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 EFEMP2O95967 443 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 IL1AP01583 271 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 CRYBB2P43320 205 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 DCDC1P59894 354 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 SPHARQ15513 63 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 ZNF385BQ569K4 471 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.37□□□□□ -1.07
TDP1-204ENST00000545686 TPGS2Q68CL5 300 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 AGTRAPQ6RW13 159 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 UNC5DQ6UXZ4 953 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 NPAS4Q8IUM7 802 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 TAGAPQ8N103 731 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 CLDN22Q8N7P3 220 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 TRIM63Q969Q1 353 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 GDF15Q99988 308 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 CNPPD1Q9BV87 410 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 RC3H2Q9HBD1 1191 aaKnown RBP8.37□□□□□ -1.07
TDP1-204ENST00000545686 MYNNQ9NPC7 610 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 EXOSC4Q9NPD3 245 aaKnown RBP8.37□□□□□ -1.07
TDP1-204ENST00000545686 SNX7Q9UNH6 387 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 RPL36Q9Y3U8 105 aaKnown RBP8.37□□□□□ -1.07
TDP1-204ENST00000545686 YIPF1Q9Y548 306 aa8.37□□□□□ -1.07
TDP1-204ENST00000545686 CENPFP49454 3210 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms