RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 C16orf78Q8WTQ4 265 aa22.26■■□□□ 1.15
FOXA1-202ENST00000545425 PIP5K1AQ99755 562 aa22.26■■□□□ 1.15
FOXA1-202ENST00000545425 SLIRPQ9GZT3 109 aaKnown RBP22.26■■□□□ 1.15
FOXA1-202ENST00000545425 CNOT2Q9NZN8 540 aaKnown RBP22.26■■□□□ 1.15
FOXA1-202ENST00000545425 GPR34Q9UPC5 381 aa22.26■■□□□ 1.15
FOXA1-202ENST00000545425 FAM32AQ9Y421 112 aaKnown RBP22.26■■□□□ 1.15
FOXA1-202ENST00000545425 TTC34A8MYJ7 566 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CCL16O15467 120 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 ZSCAN9O15535 394 aaPredicted RBP22.25■■□□□ 1.15
FOXA1-202ENST00000545425 SEMA3DO95025 777 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CCR2P41597 374 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CLK1P49759 484 aaKnown RBP22.25■■□□□ 1.15
FOXA1-202ENST00000545425 PPP5CP53041 499 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 ST8SIA6P61647 398 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 HBA1P69905 142 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 TMEM215Q68D42 235 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 GALNT10Q86SR1 603 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 KRT78Q8N1N4 520 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 AMER2Q8N7J2 671 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 GPR156Q8NFN8 814 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 DNASE1L2Q92874 299 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 ZNF764Q96H86 408 aaPredicted RBP22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CCDC177Q9NQR7 707 aaPredicted RBP22.25■■□□□ 1.15
FOXA1-202ENST00000545425 RASSF1Q9NS23 344 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CCDC59Q9P031 241 aaKnown RBP22.25■■□□□ 1.15
FOXA1-202ENST00000545425 GULP1Q9UBP9 304 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 HCN4Q9Y3Q4 1203 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 ZNF451Q9Y4E5 1061 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CUL9Q8IWT3 2517 aa22.25■■□□□ 1.15
FOXA1-202ENST00000545425 CTSLP07711 333 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 RHCEP18577 417 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 UQCRC2P22695 453 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 CTSKP43235 329 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 PCBP3P57721 371 aaKnown RBP22.24■■□□□ 1.15
FOXA1-202ENST00000545425 VBP1P61758 197 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 SPIBQ01892 262 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 DPTQ07507 201 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 TEAD2Q15562 447 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 CCSMST1Q4G0I0 132 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 LCTLQ6UWM7 567 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 TSEN54Q7Z6J9 526 aaKnown RBP22.24■■□□□ 1.15
FOXA1-202ENST00000545425 PITHD1Q9GZP4 211 aaPredicted RBP22.24■■□□□ 1.15
FOXA1-202ENST00000545425 RACGAP1Q9H0H5 632 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 PRM3Q9NNZ6 103 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 SELENONQ9NZV5 590 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 UGT2A1Q9Y4X1 527 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 EFCAB10A6NFE3 127 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 VEGFDO43915 354 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 HLA-EP13747 358 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 NR4A1P22736 598 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 HSD17B2P37059 387 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 XCR1P46094 333 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 LIMS1P48059 325 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 C2orf80Q0P641 193 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 HYAL1Q12794 435 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 RPA4Q13156 261 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 DGCR6Q14129 220 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 SMN1Q16637 294 aaKnown RBP22.24■■□□□ 1.15
FOXA1-202ENST00000545425 LEXMQ3ZCV2 418 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 ZNF385BQ569K4 471 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 ARMCX6Q7L4S7 300 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 LGI4Q8N135 537 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 SLC5A8Q8N695 610 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 TAMM41Q96BW9 452 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 TESMINQ9Y4I5 508 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 ENPP4Q9Y6X5 453 aa22.24■■□□□ 1.15
FOXA1-202ENST00000545425 AIREO43918 545 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 LILRB5O75023 590 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 MOSPD3O75425 235 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 C6orf47O95873 294 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 RPLP0P05388 317 aaKnown RBP22.23■■□□□ 1.15
FOXA1-202ENST00000545425 EPHA2P29317 976 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 IRS1P35568 1242 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 CHI3L1P36222 383 aaPredicted RBP22.23■■□□□ 1.15
FOXA1-202ENST00000545425 CDC42P60953 191 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 TIMM50Q3ZCQ8 353 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 ZNF367Q7RTV3 350 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 SLC46A3Q7Z3Q1 461 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 LRRC56Q8IYG6 542 aaPredicted RBP22.23■■□□□ 1.15
FOXA1-202ENST00000545425 TMIEQ8NEW7 156 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 DSN1Q9H410 356 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 GPATCH2Q9NW75 528 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 RAPGEFL1Q9UHV5 662 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 ITGB1BP2Q9UKP3 347 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 SLC27A6Q9Y2P4 619 aa22.23■■□□□ 1.15
FOXA1-202ENST00000545425 A0A1W2PRB8 838 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 KRT87PA6NCN2 255 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 NRG2O14511 850 aaPredicted RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 SERPINB7O75635 380 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 C1QCP02747 245 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 BMP4P12644 408 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 ETFAP13804 333 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 GABRB1P18505 474 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 CXCR2P25025 360 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 ITGB7P26010 798 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 MAGEA8P43361 318 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 RPS3AP61247 264 aaKnown RBP22.22■■□□□ 1.15
FOXA1-202ENST00000545425 CYP2A13Q16696 494 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 TIGD6Q17RP2 521 aa22.22■■□□□ 1.15
FOXA1-202ENST00000545425 PUS10Q3MIT2 529 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms