RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PEX11GQ96HA9 241 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PPP1R36Q96LQ0 422 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 EFHD1Q9BUP0 239 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NPLQ9BXD5 320 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 GPR87Q9BY21 358 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SOX17Q9H6I2 414 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MARCOQ9UEW3 520 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FARSAQ9Y285 508 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RAXQ9Y2V3 346 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 AKAP13Q12802 2813 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 DNAJB6O75190 326 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RSL1D1O76021 490 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 GBAP04062 536 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 KLK1P06870 262 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PTPN4P29074 926 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ACSM2AQ08AH3 577 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TBL3Q12788 808 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RUNX2Q13950 521 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NR6A1Q15406 480 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NKG7Q16617 165 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SPIN4Q56A73 249 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ACSM2BQ68CK6 577 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MRPL14Q6P1L8 145 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RNF165Q6ZSG1 346 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 COMMD6Q7Z4G1 85 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PROSER1Q86XN7 944 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PRSS58Q8IYP2 241 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 OR2T11Q8NH01 316 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 STT3BQ8TCJ2 826 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 C19orf60Q96EN9 201 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 APIPQ96GX9 242 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CCT7Q99832 543 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ZNF717Q9BY31 904 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RBCK1Q9BYM8 510 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 DDX31Q9H8H2 851 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CLK4Q9HAZ1 481 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SLCO1B3Q9NPD5 702 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NXT1Q9UKK6 140 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FBXW2Q9UKT8 454 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PTRH2Q9Y3E5 179 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SPACA6W5XKT8 324 aa13.69□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SEC22BO75396 215 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 EEDO75530 441 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ZGLP1P0C6A0 271 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RNH1P13489 461 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 F8A1P23610 371 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FOLR3P41439 243 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 LIM2P55344 173 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RPS18P62269 152 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 GUCY1A3Q02108 690 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SRSF6Q13247 344 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ERV3-1Q14264 604 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 GALNTL6Q49A17 601 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CCNYL2Q5T2Q4 361 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SHISA6Q6ZSJ9 500 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FAM47EQ6ZV65 393 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SHISA5Q8N114 240 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ZCCHC7Q8N3Z6 543 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 EFCAB3Q8N7B9 438 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 PIWIL2Q8TC59 973 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TBC1D20Q96BZ9 403 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 C7orf26Q96N11 449 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NUF2Q9BZD4 464 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SLC26A1Q9H2B4 701 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ACTL8Q9H568 366 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 WDR54Q9H977 334 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 C14orf105Q9NVL8 296 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RIC8BQ9NVN3 520 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ADAM29Q9UKF5 820 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TCFL5Q9UL49 500 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 DAPP1Q9UN19 280 aa13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MRPS18BQ9Y676 258 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-216ENST00000543995 NCOR2Q9Y618 2525 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 AHCTF1Q8WYP5 2266 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 IGLV3-12A0A075B6K2 115 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 A0A0A6YYD5 115 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ATP6AP2A0A1C7CYW4 349 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SLCO1B7G3V0H7 640 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 TERTO14746 1132 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CNOT3O75175 753 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ATP6AP2O75787 350 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CDC123O75794 336 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MYO1DO94832 1006 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SCELO95171 688 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 BMP10O95393 424 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 IL10P22301 178 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 MAPK12P53778 367 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 RAB38P57729 211 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FOXL2P58012 376 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 KLC1Q07866 573 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 FAM69BQ5VUD6 431 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 BROXQ5VW32 411 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ZC3H7AQ8IWR0 971 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 SPACA3Q8IXA5 215 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 ADAMTS18Q8TE60 1221 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 CHTF18Q8WVB6 975 aa13.67□□□□□ -0.22
TNFRSF1A-216ENST00000543995 STARD8Q92502 1023 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms