RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 VPS29Q9UBQ0 182 aa14.65□□□□□ -0.06
DDB1-218ENST00000540784 IGF2RP11717 2491 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 SERTM1A2A2V5 107 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 PLPP1O14494 284 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 ITM2AO43736 263 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 SEMA3DO95025 777 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 IGHEP01854 428 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 HEXBP07686 556 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 PRKAR1AP10644 381 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 RNH1P13489 461 aaKnown RBP14.64□□□□□ -0.07
DDB1-218ENST00000540784 HTR6P50406 440 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 EMP2P54851 167 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 FOXL2P58012 376 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 CXADRP78310 365 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 KLC1Q07866 573 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 SLAMF1Q13291 335 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 CRTC2Q53ET0 693 aaPredicted RBP14.64□□□□□ -0.07
DDB1-218ENST00000540784 SH2D4BQ5SQS7 431 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 MFSD4BQ5TF39 518 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 CES4AQ5XG92 561 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 FAM219BQ5XKK7 198 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 C19orf48Q6RUI8 117 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 ZC3H7AQ8IWR0 971 aaKnown RBP14.64□□□□□ -0.07
DDB1-218ENST00000540784 CA13Q8N1Q1 262 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 TBC1D20Q96BZ9 403 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 OR1F2PQ96R84 312 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 HBEGFQ99075 208 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 SPSB2Q99619 263 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 CRB3Q9BUF7 120 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 SORBS1Q9BX66 1292 aaKnown RBP14.64□□□□□ -0.07
DDB1-218ENST00000540784 MANSC1Q9H8J5 431 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 ZNF395Q9H8N7 513 aaPredicted RBP14.64□□□□□ -0.07
DDB1-218ENST00000540784 ZDHHC2Q9UIJ5 367 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 C3orf18Q9UK00 162 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 MKL2Q9ULH7 1088 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.64□□□□□ -0.07
DDB1-218ENST00000540784 FIS1Q9Y3D6 152 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 SEC16AO15027 2179 aa14.64□□□□□ -0.07
DDB1-218ENST00000540784 ACACAQ13085 2346 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 CDC14CA4D256 554 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 SLC28A1O00337 649 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 DYNC1I1O14576 645 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 JRKO75564 520 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 LYPLA1O75608 230 aaPredicted RBP14.63□□□□□ -0.07
DDB1-218ENST00000540784 UMODP07911 640 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 CHN1P15882 459 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 CERS1P27544 350 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 ARRB2P32121 409 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 OTX2P32243 289 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 BSGP35613 385 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 LIM2P55344 173 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 UGT8Q16880 541 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 IMPG1Q17R60 797 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 MINDY4Q4G0A6 757 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 SPDYAQ5MJ70 313 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 KANK2Q63ZY3 851 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 CYP20A1Q6UW02 462 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 ZNF793Q6ZN11 406 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 ATG14Q6ZNE5 492 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 PAGE2Q7Z2X7 111 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 TRIM46Q7Z4K8 759 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 RAB43Q86YS6 212 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 SHISA5Q8N114 240 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 METTL4Q8N3J2 472 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 RAB3IL1Q8TBN0 382 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 AGR3Q8TD06 166 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 MRPL1Q9BYD6 325 aaKnown RBP14.63□□□□□ -0.07
DDB1-218ENST00000540784 DDX31Q9H8H2 851 aaKnown RBP14.63□□□□□ -0.07
DDB1-218ENST00000540784 LYRM4Q9HD34 91 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 SEMA3GQ9NS98 782 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 RAP2CQ9Y3L5 183 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 SPACA6W5XKT8 324 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 DMXL2Q8TDJ6 3036 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 ACACBO00763 2458 aa14.63□□□□□ -0.07
DDB1-218ENST00000540784 ARHGAP10A1A4S6 786 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 IDSB3KWA1 339 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 FAM227AF5H4B4 570 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 B4GALT2O60909 372 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 EEDO75530 441 aaKnown RBP14.62□□□□□ -0.07
DDB1-218ENST00000540784 SCELO95171 688 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 KLK1P06870 262 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 FHP07954 510 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 JAK1P23458 1154 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 MMP11P24347 488 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 HMGCS1Q01581 520 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 BTKQ06187 659 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 BST1Q10588 318 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 TBL3Q12788 808 aaKnown RBP14.62□□□□□ -0.07
DDB1-218ENST00000540784 UGT3A2Q3SY77 523 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 TUBB8Q3ZCM7 444 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 CCNYL2Q5T2Q4 361 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 GPR180Q86V85 440 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 TMEM151BQ8IW70 566 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 ZCCHC7Q8N3Z6 543 aaKnown RBP14.62□□□□□ -0.07
DDB1-218ENST00000540784 ADAMTS18Q8TE60 1221 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 CHTF18Q8WVB6 975 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 DYDC1Q8WWB3 177 aa14.62□□□□□ -0.07
DDB1-218ENST00000540784 THAP4Q8WY91 577 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms