RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 H3BQF6 201 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SAP18O00422 153 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 RTCAO00442 366 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 MANBAO00462 879 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 PLPP1O14494 284 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 BIRC5O15392 142 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 NKX2-8O15522 239 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 NPHS1O60500 1241 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 DNAJB6O75190 326 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SH3BGRLO75368 114 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 JRKO75564 520 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SEMA3DO95025 777 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 BMP10O95393 424 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TGFB1P01137 390 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 PDYNP01213 254 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CHRNGP07510 517 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 PRKAR1AP10644 381 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF10P21506 573 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CERS1P27544 350 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 HMOX2P30519 316 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SERPINB5P36952 375 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TSFMP43897 325 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 XCR1P46094 333 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 HTR6P50406 440 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 ARFIP1P53367 373 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 PLA2G16P53816 162 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 MTTPP55157 894 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 OLR1P78380 273 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 BTN3A2P78410 334 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 MC1RQ01726 317 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 OCA2Q04671 838 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 KLC1Q07866 573 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TGM3Q08188 693 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 GALNT1Q10472 559 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CSTF3Q12996 717 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 IFT88Q13099 833 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CUL3Q13618 768 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 RCN2Q14257 317 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 ERV3-1Q14264 604 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TMEM35AQ53FP2 167 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 DEPDC1Q5TB30 811 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CES4AQ5XG92 561 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TTC19Q6DKK2 380 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 C19orf48Q6RUI8 117 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF793Q6ZN11 406 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 ATG14Q6ZNE5 492 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SHISA6Q6ZSJ9 500 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CHSY3Q70JA7 882 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 MRGPREQ86SM8 312 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CA13Q8N1Q1 262 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SRFBP1Q8NEF9 429 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 OR51Q1Q8NH59 317 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SREK1Q8WXA9 508 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 MIEF2Q96C03 454 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 FAR2Q96K12 515 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CNDP1Q96KN2 507 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 KCNC2Q96PR1 638 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 OR1F2PQ96R84 312 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SERINC2Q96SA4 455 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 HBEGFQ99075 208 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TBCDQ9BTW9 1192 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 TMUB1Q9BVT8 246 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SORBS1Q9BX66 1292 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 NPLQ9BXD5 320 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 RBCK1Q9BYM8 510 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 COPS7BQ9H9Q2 264 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 BRF2Q9HAW0 419 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 CLK4Q9HAZ1 481 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 KCNK9Q9NPC2 374 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 PRDM7Q9NQW5 492 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 LANCL2Q9NS86 450 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 SNX6Q9UNH7 406 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 KALRNO60229 2985 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 A0A0A6YYD5 115 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SERTM1A2A2V5 107 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CDC14CA4D256 554 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 IDSB3KWA1 339 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SOCS6O14544 535 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CHST10O43529 356 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 B3GALT2O43825 422 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 KRT6AP02538 564 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 KRT6BP04259 564 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SERPINE1P05121 402 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 FHP07954 510 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 CYC1P08574 325 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 UROSP10746 265 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 RNH1P13489 461 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 HSD3B1P14060 373 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 IL10P22301 178 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 HIST1H1TP22492 207 aaPredicted RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 MMP11P24347 488 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 ATP5A1P25705 553 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 PTX3P26022 381 aaPredicted RBP6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 HSD3B2P26439 372 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 OTX2P32243 289 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 BSGP35613 385 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 SSR2P43308 183 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 KRT6CP48668 564 aa6.58□□□□□ -1.36
LPCAT3-209ENST00000540060 RAP1GDS1P52306 607 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms