RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 BCL2A1Q16548 175 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 FXNQ16595 210 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 DPY19L1Q2PZI1 675 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 NHSL2Q5HYW2 709 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PEAR1Q5VY43 1037 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 ADNP2Q6IQ32 1131 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 DLEU7Q6UYE1 221 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZBTB49Q6ZSB9 765 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SLC15A3Q8IY34 581 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 KIAA2013Q8IYS2 634 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 KRT78Q8N1N4 520 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 CENPSQ8N2Z9 138 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 LSM14AQ8ND56 463 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 OR52E1Q8NGJ3 308 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 OR2A1Q8NGT9 310 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 TBC1D15Q8TC07 691 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 TMEM125Q96AQ2 219 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 NRBF2Q96F24 287 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 APOLD1Q96LR9 279 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZBTB18Q99592 522 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SARGQ9BW04 601 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 INIPQ9NRY2 104 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ADA2Q9NZK5 511 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZNF624Q9P2J8 865 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 TAC3Q9UHF0 121 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 FAM32AQ9Y421 112 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 SNX11Q9Y5W9 270 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 RP1P56715 2156 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 UNC13CQ8NB66 2214 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PCDH15Q96QU1 1955 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 RIF1Q5UIP0 2472 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 TRBV5-3A0A0A0MS03 114 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 IGKV1-8A0A0C4DH67 115 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PRORSD1PA6NEY8 169 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SULT1C4O75897 302 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SEMA3DO95025 777 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZBTB11O95625 1053 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 TBX6O95947 436 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 PGRP06401 933 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 INHBBP09529 407 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ALOX5P09917 674 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PRPS1L1P21108 318 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PSMB5P28074 263 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PEBP1P30086 187 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 TIA1P31483 386 aaKnown RBP eCLIP8.45□□□□□ -1.06
DDB1-213ENST00000539332 MASP1P48740 699 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SLC7A2P52569 658 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 RPS3AP61247 264 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 ACSM2AQ08AH3 577 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 NFYCQ13952 458 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 NRF1Q16656 503 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 HIST2H2ACQ16777 129 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 SPANXN4Q5MJ08 99 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 C6orf10Q5SRN2 563 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ACSM2BQ68CK6 577 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 HIST2H2AA3Q6FI13 130 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 TMEM53Q6P2H8 277 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 TMIGD1Q6UXZ0 262 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ERMP1Q7Z2K6 904 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 CAMKMTQ7Z624 323 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 METTL4Q8N3J2 472 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 KRTCAP2Q8N6L1 136 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 FAM47BQ8NA70 645 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZNF740Q8NDX6 193 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZNF548Q8NEK5 533 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 FAM46DQ8NEK8 389 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 DNAJB8Q8NHS0 232 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZFPM2Q8WW38 1151 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SLC13A3Q8WWT9 602 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 GTF2H4Q92759 462 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ZUFSPQ96AP4 578 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 TMIGD2Q96BF3 282 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 MAGED4Q96JG8 741 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 CGREF1Q99674 301 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 AIF1LQ9BQI0 150 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SLC39A3Q9BRY0 314 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 C9orf16Q9BUW7 83 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 RPF2Q9H7B2 306 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 OR6C2Q9NZP2 312 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SPASTQ9UBP0 616 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 MAPRE3Q9UPY8 281 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PCDHB11Q9Y5F2 797 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PCDHGB7Q9Y5F8 929 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SNX13Q9Y5W8 968 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 GPC6Q9Y625 555 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 COLEC10Q9Y6Z7 277 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PRAMEF33A0A0G2JMD5 474 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 MYOCOSA0A1B0GUC4 107 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 AQP12BA6NM10 295 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 LMO7DNF2Z398 122 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 H3BMQ9 156 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 YY2O15391 372 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 AQP9O43315 295 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 AKAP10O43572 662 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 SDC3O75056 442 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 CNOT3O75175 753 aaKnown RBP8.44□□□□□ -1.06
DDB1-213ENST00000539332 PCNAP12004 261 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 ZNF24P17028 368 aa8.44□□□□□ -1.06
DDB1-213ENST00000539332 CXCR2P25025 360 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms