RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	CCDC69	A6NI79	296 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	NKX6-3	A6NJ46	265 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	C15orf61	A6NNL5	157 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	OGT	O15294	1046 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	SIGLEC5	O15389	551 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	STAM2	O75886	525 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	NXPH2	O95156	264 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	ALPP	P05187	535 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	RPLP0	P05388	317 aa	Known RBP	4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	LYN	P07948	512 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	SP1	P08047	785 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	ALPPL2	P10696	532 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	ANPEP	P15144	967 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	MAPK3	P27361	379 aa	Predicted RBP	4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	HLA-F	P30511	346 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	MMP12	P39900	470 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	OPRL1	P41146	370 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	NSF	P46459	744 aa	Known RBP	4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	HNRNPF	P52597	415 aa	Known RBP	4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	IL1RL1	Q01638	556 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	HLA-B	Q31612	363 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	PRAMEF7	Q5VXH5	474 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	CES4A	Q5XG92	561 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	ARHGAP11A	Q6P4F7	1023 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	CCDC197	Q8NCU1	140 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	FAM76A	Q8TAV0	307 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	GPR148	Q8TDV2	347 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	CHURC1	Q8WUH1	139 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	CXorf58	Q96LI9	332 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	CARD9	Q9H257	536 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	TMEM245	Q9H330	911 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	KCNMB3	Q9NPA1	279 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	PLCXD1	Q9NUJ7	323 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	C2orf42	Q9NWW7	574 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	MIS18A	Q9NYP9	233 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	LNPEP	Q9UIQ6	1025 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	TSPAN16	Q9UKR8	245 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	PYGO1	Q9Y3Y4	419 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	NEDD4	P46934	1319 aa		4.68	□□□□□ -1.66
PRKDC-208	ENST00000536710	DISP3	Q9P2K9	1392 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	MEIOC	A2RUB1	952 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CXCL14	O95715	111 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	EPO	P01588	193 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	SFTPB	P07988	381 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	MMP10	P09238	476 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	PC	P11498	1178 aa	Known RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	C4BPB	P20851	252 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	MARCKS	P29966	332 aa	Predicted RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	SLC6A12	P48065	614 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	PITPNB	P48739	271 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CNN1	P51911	297 aa	Known RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	BPIFB3	P59826	476 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	SMC1A	Q14683	1233 aa	Known RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	MTF1	Q14872	753 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	C3AR1	Q16581	482 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CCDC40	Q4G0X9	1142 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	SPANXN4	Q5MJ08	99 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	ADAMTSL4-AS1	Q5T5F5	129 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	WLS	Q5T9L3	541 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	ARHGAP17	Q68EM7	881 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710		Q6ZVQ6	151 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	USP43	Q70EL4	1123 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	GET4	Q7L5D6	327 aa	Predicted RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	ZER1	Q7Z7L7	766 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	ADAMTSL2	Q86TH1	951 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	LEMD2	Q8NC56	503 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	TMEM185A	Q8NFB2	350 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	OR52E1	Q8NGJ3	308 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	KIAA1524	Q8TCG1	905 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CD99L2	Q8TCZ2	262 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	FAM218A	Q96MZ4	157 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	PKP2	Q99959	881 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CCM2	Q9BSQ5	444 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	PAPOLG	Q9BWT3	736 aa	Known RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	HOXD1	Q9GZZ0	328 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	S100A14	Q9HCY8	104 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	PIGV	Q9NUD9	493 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	ISY1	Q9ULR0	285 aa	Known RBP	4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	OR1A2	Q9Y585	309 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	CSNK1G3	Q9Y6M4	447 aa		4.67	□□□□□ -1.66
PRKDC-208	ENST00000536710	SPATA31D1	Q6ZQQ2	1576 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	ARHGAP42	A6NI28	874 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	CPNE6	O95741	557 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	SFN	P31947	248 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	GEM	P55040	296 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	STARD6	P59095	220 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	IRX4	P78413	519 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	DHODH	Q02127	395 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	GABPA	Q06546	454 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	HEPACAM	Q14CZ8	416 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	FAM189A2	Q15884	450 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	CARTPT	Q16568	116 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	MFSD7	Q6UXD7	560 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	NLRP14	Q86W24	1093 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	DND1	Q8IYX4	353 aa	Known RBP	4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	SLC22A15	Q8IZD6	547 aa		4.66	□□□□□ -1.66
PRKDC-208	ENST00000536710	ZNF248	Q8NDW4	579 aa		4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms