RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SOD1P00441 154 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 LIMS1P48059 325 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 TUBA3EQ6PEY2 450 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 PLEKHG7Q6ZR37 379 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 USP43Q70EL4 1123 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 SLC46A3Q7Z3Q1 461 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 TRAPPC5Q8IUR0 188 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 STX19Q8N4C7 294 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF675Q8TD23 568 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 UTP15Q8TED0 518 aaKnown RBP15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 CRELD1Q96HD1 420 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 LINC00615Q96LM1 132 aaPredicted RBP15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 OR2AG1Q9H205 316 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 DPEP2Q9H4A9 486 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 ZBTB20Q9HC78 741 aaPredicted RBP15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 ICKQ9UPZ9 632 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 ITM2BQ9Y287 266 aa15.33■□□□□ 0.05
CHMP1A-202ENST00000535997 TAF4O00268 1085 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 KPNA3O00505 521 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 RHOP08100 348 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 ARAFP10398 606 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 RHCEP18577 417 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 TGFBR1P36897 503 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 OLR1P78380 273 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 IER5LQ5T953 404 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 SNX29P2Q8IUI4 249 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 LACC1Q8IV20 430 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 AMER2Q8N7J2 671 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 VN1R2Q8NFZ6 395 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC6A16Q9GZN6 736 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 TRIM39Q9HCM9 518 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 CCDC177Q9NQR7 707 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 IMPAD1Q9NX62 359 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 SAGE1Q9NXZ1 904 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 GPR83Q9NYM4 423 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 ENPP4Q9Y6X5 453 aa15.33■□□□□ 0.04
CHMP1A-202ENST00000535997 MTCL1Q9Y4B5 1905 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ARRDC5A6NEK1 342 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 PLK4O00444 970 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 SLC9A3R1O14745 358 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ADAM23O75077 832 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 RPLP0P05388 317 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 RB1P06400 928 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 STSP08842 583 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 CCL5P13501 91 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 CSF2RAP15509 400 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 GADD45AP24522 165 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ST8SIA6P61647 398 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ST3GAL4Q11206 333 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 TMIGD1Q6UXZ0 262 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 RTL10Q7L3V2 364 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 TRMT11Q7Z4G4 463 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 TRIM74Q86UV6 250 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 TRIM73Q86UV7 250 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 MAPKAP1Q9BPZ7 522 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ACSL6Q9UKU0 697 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 GPR34Q9UPC5 381 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ANGPT4Q9Y264 503 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 PRAMEF33A0A0G2JMD5 474 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ISPDA4D126 451 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 PCDH17O14917 1159 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 MPZL2O60487 215 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 PRAMEF10O60809 474 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 GADD45GO95257 159 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 PRNPP04156 253 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 CLTBP09497 229 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 CISD3P0C7P0 127 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 UQCRC2P22695 453 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ACADLP28330 430 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 CDC42P60953 191 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 RPS3AP61247 264 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 MEF2AQ02078 507 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 PTGES3Q15185 160 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 AGAP7PQ5VUJ5 663 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF765Q7L2R6 523 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 ZNF366Q8N895 744 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 OR5AK3PQ8NH89 298 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 MIEF1Q9NQG6 463 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 AHSPQ9NZD4 102 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 UGT2A1Q9Y4X1 527 aa15.32■□□□□ 0.04
CHMP1A-202ENST00000535997 SH3D21A4FU49 640 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 METTL15A6NJ78 407 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 SAGE2PA6NJ88 616 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 J3KTA2 159 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 CCNB2O95067 398 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 IL3P08700 152 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 DGKGP49619 791 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 ERVFC1P60507 584 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 IRF3Q14653 427 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 REEP3Q6NUK4 255 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 MRPL43Q8N983 215 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 OR9Q2Q8NGE9 314 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 NLNQ9BYT8 704 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 NXF2Q9GZY0 626 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 SPNS1Q9H2V7 528 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 MS4A12Q9NXJ0 267 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 RAB23Q9ULC3 237 aa15.31■□□□□ 0.04
CHMP1A-202ENST00000535997 WBP11Q9Y2W2 641 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms