RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 HSF1Q00613 529 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ACTN3Q08043 901 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 RGS1Q08116 209 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 DDX39BQ13838 428 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 TLR1Q15399 786 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PDK4Q16654 411 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PFKFB4Q16877 469 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ADPRMQ3LIE5 342 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 SULT1C3Q6IMI6 304 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 SCUBE1Q8IWY4 988 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 TMEM151AQ8N4L1 468 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 TEX9Q8N6V9 391 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 APCDD1LQ8NCL9 501 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 MDS2Q8NDY4 140 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 GABPB2Q8TAK5 448 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ELP5Q8TE02 316 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF473Q8WTR7 871 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 CDKL2Q92772 493 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 MTFMTQ96DP5 389 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 WDR34Q96EX3 536 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 MS4A8Q9BY19 250 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF717Q9BY31 904 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 VPS11Q9H270 941 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ACSS3Q9H6R3 686 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ZBTB26Q9HCK0 441 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PNO1Q9NRX1 252 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 NSMCE4AQ9NXX6 385 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 COPG2Q9UBF2 871 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PLEKHB1Q9UF11 243 aaPredicted RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 NFU1Q9UMS0 254 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 G3BP2Q9UN86 482 aaKnown RBP9.01□□□□□ -0.97
SSBP3-215ENST00000533946 NCKAP5O14513 1909 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 ABCA12Q86UK0 2595 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 GTF3C1Q12789 2109 aa9.01□□□□□ -0.97
SSBP3-215ENST00000533946 PINLYPA6NC86 204 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 OR5H15A6NDH6 313 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 GABRR3A8MPY1 467 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 POC1B-GALNT4F8VUJ3 575 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 OR7A17O14581 309 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 EEDO75530 441 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 MYO1DO94832 1006 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 GBAP04062 536 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 GSTA2P09210 222 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 PCNAP12004 261 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 RNH1P13489 461 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 STX2P32856 288 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 MAGEA12P43365 314 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 ATP6V0D1P61421 351 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 IRF8Q02556 426 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 CAV1Q03135 178 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 E2F2Q14209 437 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 WHAMMP3Q1A5X7 153 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 TECRLQ5HYJ1 363 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 IRAK1BP1Q5VVH5 260 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 C18orf63Q68DL7 685 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 ABHD13Q7L211 337 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 MDGA2Q7Z553 956 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 FGD2Q7Z6J4 655 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 CHERPQ8IWX8 916 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 MMP21Q8N119 569 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 TRPV3Q8NET8 790 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 OR2L5Q8NG80 312 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 OR7G3Q8NG95 312 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 OR52B6Q8NGF0 335 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 M1APQ8TC57 530 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 SSC4DQ8WTU2 575 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 SLC44A1Q8WWI5 657 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 GAL3ST3Q96A11 431 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 ANKRD9Q96BM1 317 aaPredicted RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 PPWD1Q96BP3 646 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 OR1F2PQ96R84 312 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 MTERF1Q99551 399 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 REXO4Q9GZR2 422 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 C12orf65Q9H3J6 166 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 EPS8L2Q9H6S3 715 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 MMP25Q9NPA2 562 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 NUDT4Q9NZJ9 180 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 CPSF2Q9P2I0 782 aaKnown RBP9□□□□□ -0.97
SSBP3-215ENST00000533946 TXNDC16Q9P2K2 825 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 ACOT9Q9Y305 439 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 HRH3Q9Y5N1 445 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 PDZD2O15018 2839 aa9□□□□□ -0.97
SSBP3-215ENST00000533946 AKAP9Q99996 3911 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF407Q9C0G0 2248 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 TRBV11-1A0A0K0K1C0 115 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PABPN1LA6NDY0 278 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 SAGE2PA6NJ88 616 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 GLOD5A6NK44 160 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 G3V3Y1 287 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 K7EPI3 171 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 TMPRSS11DO60235 418 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 KLK8O60259 260 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 PRAMEF2O60811 474 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 ZG16O60844 167 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 H2AFYO75367 372 aaKnown RBP8.99□□□□□ -0.97
SSBP3-215ENST00000533946 CLEC3AO75596 197 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 RHOXF2BP0C7M4 288 aa8.99□□□□□ -0.97
SSBP3-215ENST00000533946 GP1BBP13224 206 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms