RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 BTN2A2Q8WVV5 523 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 TRIM39Q9HCM9 518 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 SNTG1Q9NSN8 517 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 STMN3Q9NZ72 180 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 FTSJ1Q9UET6 329 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 KLHL21Q9UJP4 597 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 SLC6A14Q9UN76 642 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 STUB1Q9UNE7 303 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 MAPRE3Q9UPY8 281 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 A0A0B4J293 547 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 ZNF780AO75290 641 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 TRIM3O75382 744 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CD160O95971 181 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 ALPIP09923 528 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 PKLRP30613 574 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CSTF2P33240 577 aaKnown RBP eCLIP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CRYBB2P43320 205 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 ZNF33BQ06732 778 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 FAPQ12884 760 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 LARS2Q15031 903 aaKnown RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 PTCHD4Q6ZW05 846 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CHST9Q7L1S5 443 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 RNF31Q96EP0 1072 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 C11orf54Q9H0W9 315 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 DIABLOQ9NR28 239 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 KLHL42Q9P2K6 505 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CRLS1Q9UJA2 301 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 MAFFQ9ULX9 164 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 HCN4Q9Y3Q4 1203 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 GPSM3Q9Y4H4 160 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 YIPF1Q9Y548 306 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 LINC00854A0A1B0GVQ3 168 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 HYKKA2RU49 373 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 SCAMP2O15127 329 aaKnown RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 LGI1O95970 557 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CSF3P09919 207 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 TNFRSF1BP20333 461 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CBLP22681 906 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 AOAHP28039 575 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 LIMS1P48059 325 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 CD83Q01151 205 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 FCHO2Q0JRZ9 810 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 ZXDCQ2QGD7 858 aaPredicted RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 FAM131AQ6UXB0 335 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 FAM129BQ96TA1 746 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 SLC25A19Q9HC21 320 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 IL26Q9NPH9 171 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 DNMT3LQ9UJW3 386 aa14.17□□□□□ -0.14
CAPN1-224ENST00000533129 RUVBL1Q9Y265 456 aaKnown RBP14.17□□□□□ -0.14
CAPN1-224ENST00000533129 TRBC1P01850 177 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 HMGA1P17096 107 aaKnown RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ATP5C1P36542 298 aaKnown RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 SOX3P41225 446 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 HNMTP50135 292 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ZXDBP98169 803 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 EFR3AQ14156 821 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 MEDAGQ5VYS4 303 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 LYPD8Q6UX82 237 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 OTOP2Q7RTS6 562 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 NAGSQ8N159 534 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 C1orf52Q8N6N3 182 aaKnown RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 VPS37AQ8NEZ2 397 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 KIAA1143Q96AT1 154 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 REPS1Q96D71 796 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 TRMT2BQ96GJ1 504 aaKnown RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 MYO19Q96H55 970 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 MSLNLQ96KJ4 702 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ZFYVE1Q9HBF4 777 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 FZD3Q9NPG1 666 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 MRPL17Q9NRX2 175 aaKnown RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 NDUFB11Q9NX14 153 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 A0A1B0GVM2 712 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ARRDC5A6NEK1 342 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ARHGEF9O43307 516 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 JUPP14923 745 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 IL12RB1P42701 662 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 HMGA2P52926 109 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 DAB2P98082 770 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 TNK1Q13470 666 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 GAB1Q13480 694 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 GPR33Q49SQ1 333 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ARMC12Q5T9G4 340 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ANXA8L1Q5VT79 327 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 RNF219Q5W0B1 726 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 LINGO4Q6UY18 593 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 UBE2R2Q712K3 238 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 NPAS3Q8IXF0 933 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 ELMOD2Q8IZ81 293 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 HS6ST3Q8IZP7 471 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 FAM109AQ8N4B1 249 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 FAM46DQ8NEK8 389 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 PIH1D2Q8WWB5 315 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 SLC25A46Q96AG3 418 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 CLIP3Q96DZ5 547 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 COPS8Q99627 209 aa14.16□□□□□ -0.14
CAPN1-224ENST00000533129 TRAF4Q9BUZ4 470 aaPredicted RBP14.16□□□□□ -0.14
CAPN1-224ENST00000533129 SLC12A9Q9BXP2 914 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms