RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TMEM74Q96NL1 305 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 TRIM39Q9HCM9 518 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 TRIM36Q9NQ86 728 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 NLGN3Q9NZ94 848 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 GRHPRQ9UBQ7 328 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 SETD1AO15047 1707 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 A0A1W2PP18 115 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 METTL21EPA6NDL7 271 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF99A8MXY4 864 aaPredicted RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 EIF5AP63241 154 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 LRIF1Q5T3J3 769 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 B3GNT4Q9C0J1 378 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 SCML1Q9UN30 329 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 C1GALT1C1LP0DN25 315 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 CDKN2DP55273 166 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 REEP3Q6NUK4 255 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 USP53Q70EK8 1073 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF101Q8IZC7 436 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 TAS2R1Q9NYW7 299 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 E7ENX8 843 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 DIRAS1O95057 198 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 RNH1P13489 461 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 HSD3B1P14060 373 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 HSD3B2P26439 372 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 RPS15P62841 145 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 TYSND1Q2T9J0 566 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 C18orf21Q32NC0 220 aaPredicted RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ARMC10Q8N2F6 343 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ZFP3Q96NJ6 502 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 REEP4Q9H6H4 257 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 SP140LQ9H930 580 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 TIGARQ9NQ88 270 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 MARCH4Q9P2E8 410 aaPredicted RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 WASF3Q9UPY6 502 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 EI24O14681 340 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ORC5O43913 435 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 FPR1P21462 350 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 FBLP22087 321 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 EDNRAP25101 427 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ACSL1P33121 698 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 RORCP51449 518 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 NIPAL4Q0D2K0 466 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ADAMTS18Q8TE60 1221 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 HCN2Q9UL51 889 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 PLCL2Q9UPR0 1127 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ZFR2Q9UPR6 939 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 SLX4Q8IY92 1834 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TBX1O43435 398 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 CHCHD4Q8N4Q1 142 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 KCTD7Q96MP8 289 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 PTGDR2Q9Y5Y4 395 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TEX13CA0A0J9YWL9 993 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 M0QZQ0 153 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 KCNC1P48547 511 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 KIAA0319Q5VV43 1072 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 NCEH1Q6PIU2 408 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 GATSQ8NAP1 163 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF548Q8NEK5 533 aaPredicted RBP14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 BBS10Q8TAM1 723 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TMCO6Q96DC7 493 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TCEAL4Q96EI5 215 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 DFNA5O60443 496 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TRAM2Q15035 370 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 PLXDC1Q8IUK5 500 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 OR4K1Q8NGD4 311 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 OR5L2Q8NGL0 311 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 PMM1Q92871 262 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 HHIPQ96QV1 700 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 RARRES3Q9UL19 164 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 FABP12A6NFH5 140 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 NPTX1Q15818 432 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 C1orf189Q5VU69 101 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF627Q7L945 461 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 SLITRK4Q8IW52 837 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 CCDC107Q8WV48 283 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 NXPE2Q96DL1 559 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF382Q96SR6 550 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 A0A1B0GVI7 797 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 EFCAB9A8MZ26 197 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 PDYNP01213 254 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 C8BP07358 591 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 AZGP1P25311 298 aaKnown RBP14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 AQP4P55087 323 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TPRG1LQ5T0D9 272 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 TESCQ96BS2 214 aa14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 SH3YL1Q96HL8 342 aaPredicted RBP14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 YTHDF1Q9BYJ9 559 aaKnown RBP14.23□□□□□ -0.13
PCDHA9-202ENST00000532602 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 CAPZA1P52907 286 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 DNAJB13P59910 316 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 MVKQ03426 396 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 PNPLA1Q8N8W4 532 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 NPLQ9BXD5 320 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 RHCGQ9UBD6 479 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 MAPK3P27361 379 aaPredicted RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 EIF1AXP47813 144 aaKnown RBP14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 GSK3BP49841 420 aa14.22□□□□□ -0.13
PCDHA9-202ENST00000532602 MERTKQ12866 999 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms