RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 CDKN2AIPNLQ96HQ2 116 aa11.71□□□□□ -0.54
ERGIC1-208ENST00000520399 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.54
ERGIC1-208ENST00000520399 GKN1Q9NS71 199 aa11.71□□□□□ -0.54
ERGIC1-208ENST00000520399 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 POLR1CO15160 346 aaPredicted RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 ATP1B2P14415 290 aaPredicted RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 HK1P19367 917 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 HOXD13P35453 343 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 DLSTP36957 453 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 GALNT2Q10471 571 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 DSG2Q14126 1118 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 GPR139Q6DWJ6 353 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SMARCD3Q6STE5 483 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 LYSMD3Q7Z3D4 306 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 LNX2Q8N448 690 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SNX18Q96RF0 628 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SLC38A3Q99624 504 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 PSD2Q9BQI7 771 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 PNO1Q9NRX1 252 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 ZNF358Q9NW07 568 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SLC2A6Q9UGQ3 507 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SPO11Q9Y5K1 396 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TVP23AA6NH52 213 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SAP18O00422 153 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 NOBOXO60393 691 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SRPRAP08240 638 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 EFNA1P20827 205 aaPredicted RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 AGXTP21549 392 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 GSTM2P28161 218 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TMEM164Q5U3C3 297 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 BRAT1Q6PJG6 821 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 ABHD13Q7L211 337 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 HID1Q8IV36 788 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 ANGPTL6Q8NI99 470 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SLC39A13Q96H72 371 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TM9SF2Q99805 663 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 OR51V1Q9H2C8 321 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 WDR26Q9H7D7 661 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 HAS3O00219 553 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SCAMP1O15126 338 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SLC31A1O15431 190 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 EVI2BP34910 448 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 CHRNA6Q15825 494 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SPIN4Q56A73 249 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 PGAP1Q75T13 922 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 VASH1Q7L8A9 365 aaPredicted RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 KBTBD6Q86V97 674 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 PROKR2Q8NFJ6 384 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 SLC32A1Q9H598 525 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 LDAHQ9H6V9 325 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 AKTIPQ9H8T0 292 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 THUMPD1Q9NXG2 353 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 MRPS17Q9Y2R5 130 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 ITGA5P08648 1049 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 HAPLN1P10915 354 aaPredicted RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 CXCR1P25024 350 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 EDNRAP25101 427 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 CLCN4P51793 760 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 MADCAM1Q13477 382 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 PON3Q15166 354 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 MS4A13Q5J8X5 152 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 RFPL4BQ6ZWI9 263 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 ZC3HC1Q86WB0 502 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 KLHL6Q8WZ60 621 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 MAELQ96JY0 434 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 KCNK13Q9HB14 408 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TEX264Q9Y6I9 313 aa11.7□□□□□ -0.54
ERGIC1-208ENST00000520399 TTLL8A6PVC2 850 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 NPIPA5E9PKD4 350 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 HCRTO43612 131 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 PCDHGA12O60330 932 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 OAZ2O95190 189 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 LATS1O95835 1130 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 HOXB9P17482 250 aaPredicted RBP11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 PLA2G16P53816 162 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 CRISP3P54108 245 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 NRLP54845 237 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 ERVK-25P63136 954 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 TLE3Q04726 772 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 SLC13A2Q13183 592 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 ZNF280BQ86YH2 543 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 CELF5Q8N6W0 485 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 OR4C15Q8NGM1 316 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 AUTS2Q8WXX7 1259 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 SCRN2Q96FV2 425 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 MTERF1Q99551 399 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 ZIM2Q9NZV7 527 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 NPIPA1Q9UND3 350 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 SPIN1Q9Y657 262 aaPredicted RBP11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
ERGIC1-208ENST00000520399 EDDM13A0A1B0GTR0 161 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms