RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 COL22A1Q8NFW1 1626 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 ATRNO75882 1429 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 MROH7-TTC4A0A0A0MT08 1334 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 MROH5Q6ZUA9 1318 aa2.92□□□□□ -1.94
HMGB1P41-201ENST00000520234 GLI3P10071 1580 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ATAD5Q96QE3 1844 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 PKD1L3Q7Z443 1732 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 RTL9Q8NET4 1388 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 KLF18A0A0U1RQI7 1052 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 MEIOCA2RUB1 952 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 CTAGE15A4D2H0 777 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 CASTOR2A6NHX0 329 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 MSGN1A6NI15 193 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 TSPY2A6NKD2 308 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SIGLEC16A6NMB1 481 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANXA2P2A6NMY6 339 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 PES1O00541 588 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 NDUFAB1O14561 156 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 IFIT3O14879 490 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 GPAA1O43292 621 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SNX3O60493 162 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 KHDRBS3O75525 346 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ACSL3O95573 720 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANP32DO95626 131 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 BAG3O95817 575 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 APOHP02749 345 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 VTNP04004 478 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 RAF1P04049 648 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 RHOXF2BP0C7M4 288 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 PCP11498 1178 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF24P17028 368 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 CYP11B2P19099 503 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ALDH4A1P30038 563 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 RDXP35241 583 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 MDH1P40925 334 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SYKP43405 635 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 CLDN15P56746 228 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 UBASH3AP57075 661 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 PPARDQ03181 441 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF273Q14593 569 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 HERC3Q15034 1050 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 STK38Q15208 465 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 UGP2Q16851 508 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM174BQ3ZCQ3 159 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM133BQ5BKY9 247 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC10A5Q5PT55 438 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 C6orf136Q5SQH8 315 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 LCN1P1Q5VSP4 162 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPECC1LQ69YQ0 1117 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR4A47Q6IF82 309 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 FBXL22Q6P050 247 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 EMBQ6PCB8 327 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 PIGWQ7Z7B1 504 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 CTAGE6Q86UF2 777 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC35F6Q8N357 371 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF843Q8N446 348 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 EIF1ADQ8N9N8 165 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SMYD1Q8NB12 490 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 MLKLQ8NB16 471 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 TMEM178AQ8NBL3 297 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 DBF4BQ8NFT6 615 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 KBTBD8Q8NFY9 601 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR5AP2Q8NGF4 316 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 VANGL1Q8TAA9 524 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 PROX1Q92786 737 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC51Q96ER9 411 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 DTNBP1Q96EV8 351 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM71F1Q96KD3 344 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 FER1L6-AS2Q96M78 137 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF317Q96PQ6 595 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 NAPGQ99747 312 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SYT15Q9BQS2 421 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 RHOXF2Q9BQY4 288 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 DESI2Q9BSY9 194 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 LRRC2Q9BYS8 371 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 EDEM3Q9BZQ6 932 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 KRT23Q9C075 422 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 P2RY12Q9H244 342 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 SUDS3Q9H7L9 328 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZWILCHQ9H900 591 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 LY9Q9HBG7 655 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 XAB2Q9HCS7 855 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 FGF22Q9HCT0 170 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 GDF3Q9NR23 364 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ATAD3AQ9NVI7 634 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 GIMAP2Q9UG22 337 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 HOOK1Q9UJC3 728 aaKnown RBP2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANAPC5Q9UJX4 755 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 GMEB1Q9Y692 573 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 KCPQ6ZWJ8 1503 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 MYH4Q9Y623 1939 aa2.91□□□□□ -1.94
HMGB1P41-201ENST00000520234 RGPD2P0DJD1 1756 aa2.9□□□□□ -1.94
HMGB1P41-201ENST00000520234 A0A087WV48 116 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 A0A1W2PPK0 400 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCT8L1PA6NM43 557 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 CPLX1O14810 134 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZG16O60844 167 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATP6AP2O75787 350 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 KRT33AO76009 404 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 GAS8-AS1O95177 125 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms