RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 EMX1Q04741 257 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PLP2Q04941 152 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DLX2Q07687 328 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SREBF2Q12772 1141 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TFCP2Q12800 502 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 IFRD2Q12894 506 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRKAA1Q13131 559 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPA4Q13156 261 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SGCGQ13326 291 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 EXOSC2Q13868 293 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 BMPR2Q13873 1038 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SNTB1Q13884 538 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCARB2Q14108 478 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DAG1Q14118 895 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 FGFBP1Q14512 234 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PTGR1Q14914 329 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNHIT3Q15649 155 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TATDN3Q17R31 274 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC39A12Q504Y0 691 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2B11Q5JQS5 317 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CATSPEREQ5SY80 951 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARHGAP40Q5TG30 622 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LIN9Q5TKA1 542 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LRRC38Q5VT99 294 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 NXNL2Q5VZ03 156 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CD276Q5ZPR3 534 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PLA2G4FQ68DD2 849 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAET1GQ6H3X3 334 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LAMTOR1Q6IAA8 161 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 JADE1Q6IE81 842 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RGS7BPQ6MZT1 257 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DPY19L2P1Q6NXN4 242 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PMF1Q6P1K2 205 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 C3P1Q6ZMU1 363 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MSANTD1Q6ZTZ1 278 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LRRC8DQ7L1W4 858 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RABEPKQ7Z6M1 372 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PEG10Q86TG7 708 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MRPL52Q86TS9 123 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZFAND4Q86XD8 727 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNF130Q86XS8 419 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADGRF4Q8IZF3 695 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 BLIDQ8IZY5 108 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LCORLQ8N3X6 602 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 C1orf52Q8N6N3 182 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 UXS1Q8NBZ7 420 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM83FQ8NEG4 500 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR52N2Q8NGI0 321 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR56B2PQ8NGI1 322 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 OR2T11Q8NH01 316 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MOSPD2Q8NHP6 518 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 HUS1BQ8NHY5 278 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 C9orf43Q8TAL5 461 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 STOML3Q8TAV4 291 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LNX1Q8TBB1 728 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 BPIFB1Q8TDL5 484 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DIO2Q92813 273 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CORO2AQ92828 525 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 HGDQ93099 445 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM203Q969S6 136 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 HDAC10Q969S8 669 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RHBDF1Q96CC6 855 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RCN3Q96D15 328 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 R3HDM4Q96D70 268 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 OTUB2Q96DC9 234 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CCDC126Q96EE4 140 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 FUBP3Q96I24 572 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SERAC1Q96JX3 654 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 COQ10AQ96MF6 247 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MBOAT7Q96N66 472 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRNT1Q96Q11 434 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LGMNQ99538 433 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 MMP19Q99542 508 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 VRK1Q99986 396 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 GINS4Q9BRT9 223 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 YIPF4Q9BSR8 244 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DUSP26Q9BV47 211 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMED9Q9BVK6 235 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CDK19Q9BWU1 502 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 BBS2Q9BXC9 721 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 B3GNT5Q9BYG0 378 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 CPEB1Q9BZB8 566 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SRRQ9GZT4 340 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 PUS7LQ9H0K6 701 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 GAL3ST2Q9H3Q3 398 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DUSP21Q9H596 190 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ASB7Q9H672 318 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 REEP4Q9H6H4 257 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ESRP2Q9H6T0 727 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 BCAS3Q9H6U6 928 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 DDX31Q9H8H2 851 aaKnown RBP4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC28A3Q9HAS3 691 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 VAT1LQ9HCJ6 419 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 IL1RAPQ9NPH3 570 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 ASCL3Q9NQ33 180 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 XPNPEP1Q9NQW7 623 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 AGPAT3Q9NRZ7 376 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAB20Q9NX57 234 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 LUZP4Q9P127 313 aa4.62□□□□□ -1.67
HMGB1P19-201ENST00000517578 FBLN5Q9UBX5 448 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms