RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 G3BP2Q9UN86 482 aaKnown RBP6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 SNX6Q9UNH7 406 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 STK38LQ9Y2H1 464 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 PLLPQ9Y342 182 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 FER1L5A0AVI2 2057 aa6.75□□□□□ -1.33
PDLIM5-215ENST00000511586 LOC102723996A0A087X1L8 192 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 NSG1A0A0A6YYJ2 146 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 A0A1W2PQ72 361 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 OR2W5A6NFC9 320 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 A6NL46 340 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 MAGEB17A8MXT2 336 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 C4orf51C9J302 202 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 SAP18O00422 153 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CLDN4O14493 209 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 KLHL41O60662 606 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 PRMT3O60678 531 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 B4GALT2O60909 372 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 SH3BGRLO75368 114 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CDC123O75794 336 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CEACAM4O75871 244 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 HPP00738 406 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 C8orf89P0DMQ9 161 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 HIST1H1TP22492 207 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ATP5A1P25705 553 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 SSR2P43308 183 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 NEK2P51955 445 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 RAP1GDS1P52306 607 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ARFIP1P53367 373 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 PKNOX1P55347 436 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 MAGOHP61326 146 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 RPS13P62277 151 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 RHAGQ02094 409 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ASPHQ12797 758 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 LCP2Q13094 533 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 IFT88Q13099 833 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CUL3Q13618 768 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 RCN2Q14257 317 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ABRAXAS2Q15018 415 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 NSDHLQ15738 373 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CFAP157Q5JU67 520 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 LIPMQ5VYY2 423 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 OR4C11Q6IEV9 310 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 TCTN3Q6NUS6 607 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 GPRIN3Q6ZVF9 776 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 NDUFAF7Q7L592 441 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CPEB2Q7Z5Q1 589 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 UBE3DQ7Z6J8 389 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 SHISA5Q8N114 240 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 RNF175Q8N4F7 328 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 CCNYL1Q8N7R7 359 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ACOT4Q8N9L9 421 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 PLPP5Q8NEB5 264 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ARMC2Q8NEN0 867 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 FDCSPQ8NFU4 85 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 C9orf43Q8TAL5 461 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ADAMTS18Q8TE60 1221 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 C8orf44Q96CB5 159 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 MTFMTQ96DP5 389 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ZNF382Q96SR6 550 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 SERPINI1Q99574 410 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 SLC25A23Q9BV35 468 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 RBCK1Q9BYM8 510 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 C12orf65Q9H3J6 166 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 GSTO2Q9H4Y5 243 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ELOVL6Q9H5J4 265 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 ZNF160Q9HCG1 818 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 LYRM4Q9HD34 91 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 LANCL2Q9NS86 450 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 C19orf25Q9UFG5 118 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 TRPS1Q9UHF7 1281 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 PPT2Q9UMR5 302 aa6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 PCDHGA9Q9Y5G4 932 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-215ENST00000511586 MGAQ8IWI9 3026 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 IGHV1-45A0A0A0MS14 117 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 A0A1B0GTL3 188 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 FAM227AF5H4B4 570 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 RTCAO00442 366 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 PLPP1O14494 284 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 TRIM13O60858 407 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 SPAG7O75391 227 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 OR4F21O95013 312 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 SEMA3DO95025 777 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 SCELO95171 688 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 ESRRBO95718 433 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 KRT6AP02538 564 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 KRT6BP04259 564 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 ALPPP05187 535 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 ENO1P06733 434 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 COX6A1P12074 109 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 ICAM2P13598 275 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 ITGA3P26006 1051 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 CERS1P27544 350 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 KRT6CP48668 564 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 PGDP52209 483 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 EFNA3P52797 238 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 LIM2P55344 173 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 SOX8P57073 446 aa6.73□□□□□ -1.33
PDLIM5-215ENST00000511586 RAB38P57729 211 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms