RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 NIPAL1Q6NVV3 410 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 PRMT9Q6P2P2 845 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF549Q6P9A3 640 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CNSTQ6PJW8 725 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CYHR1Q6ZMK1 362 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 RINLQ6ZS11 566 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 KIAA0408Q6ZU52 694 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 TTLL10Q6ZVT0 673 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CRLF3Q8IUI8 442 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 DENND6AQ8IWF6 608 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 FAM20CQ8IXL6 584 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 KBTBD2Q8IY47 623 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 BANPQ8N9N5 519 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 TTC29Q8NA56 475 aaPredicted RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 FDCSPQ8NFU4 85 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ACTRT2Q8TDY3 377 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 EME1Q96AY2 570 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 APOPT1Q96IL0 206 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CYTH2Q99418 400 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 SMAD5Q99717 465 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 SLC30A3Q99726 388 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CCT7Q99832 543 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 EBNA1BP2Q99848 306 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 TMEM120AQ9BXJ8 343 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ACSS3Q9H6R3 686 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 LRRC4CQ9HCJ2 640 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 SLC22A11Q9NSA0 550 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CUTCQ9NTM9 273 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 C20orf96Q9NUD7 363 aaPredicted RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 ATAD3AQ9NVI7 634 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 DHCR7Q9UBM7 475 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 NXT1Q9UKK6 140 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 FBXO5Q9UKT4 447 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 KLHL20Q9Y2M5 609 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 MED16Q9Y2X0 877 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 PTRH2Q9Y3E5 179 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 DTNAQ9Y4J8 743 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 IKBKGQ9Y6K9 419 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 CCDC88CQ9P219 2028 aa7.64□□□□□ -1.19
SCN1A-207ENST00000507401 PRRC2CQ9Y520 2896 aaKnown RBP7.64□□□□□ -1.19
SCN1A-207ENST00000507401 FER1L5A0AVI2 2057 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 OR2A25A4D2G3 310 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 VSTM2BA6NLU5 285 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ARHGEF33A8MVX0 844 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 E7ENX8 843 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PYCARD-AS1I3L0S3 204 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 TXNDC9O14530 226 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CNOT3O75175 753 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 VPS26AO75436 327 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 IPO13O94829 963 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CCNDBP1O95273 360 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 BAG2O95816 211 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PDGFAP04085 211 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 TFAP2AP05549 437 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CREB1P16220 341 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PGAM1P18669 254 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 KRT4P19013 534 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ITGAXP20702 1163 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 MMP11P24347 488 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 HRH2P25021 359 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ADSLP30566 484 aaPredicted RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 OTX2P32243 289 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 BDKRB1P46663 353 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 TMED10P49755 219 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PNLIPRP1P54315 467 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ARL4CP56559 192 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 TAP2Q03519 686 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 FOLH1Q04609 750 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CHAF1BQ13112 559 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ATP1A4Q13733 1029 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 NKG7Q16617 165 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 KCTD19Q17RG1 926 aaPredicted RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 SPANXN3Q5MJ09 141 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 DCAF10Q5QP82 559 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 FAM69BQ5VUD6 431 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 GARNL3Q5VVW2 1013 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PGM2L1Q6PCE3 622 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 IGFL3Q6UXB1 125 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 RNF44Q7L0R7 432 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PPP1R32Q7Z5V6 425 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 GALNT7Q86SF2 657 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 MRGPREQ86SM8 312 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ATCAYQ86WG3 371 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CNTN4Q8IWV2 1026 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 CLEC1AQ8NC01 280 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 C2CD4AQ8NCU7 369 aaPredicted RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 UHMK1Q8TAS1 419 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ABTB1Q969K4 478 aaPredicted RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 MIB2Q96AX9 1013 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 NMD3Q96D46 503 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 LRRC39Q96DD0 335 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 MVB12AQ96EY5 273 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 PKP4Q99569 1192 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ZFYVE21Q9BQ24 234 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 TRIM56Q9BRZ2 755 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 AARSD1Q9BTE6 412 aaKnown RBP7.63□□□□□ -1.19
SCN1A-207ENST00000507401 DPH7Q9BTV6 452 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 DRC3Q9H069 523 aa7.63□□□□□ -1.19
SCN1A-207ENST00000507401 ZNF304Q9HCX3 659 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms