RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 RAB38P57729 211 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 FRG1Q14331 258 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 MORF4L2Q15014 288 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CES4AQ5XG92 561 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 TRIM40Q6P9F5 258 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 SBSNQ6UWP8 590 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 SPNS3Q6ZMD2 512 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CEP128Q6ZU80 1094 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 ADAMTSL2Q86TH1 951 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 SLC22A16Q86VW1 577 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 ZNF227Q86WZ6 799 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CHERPQ8IWX8 916 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 TCAIMQ8N3R3 496 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 APCDD1LQ8NCL9 501 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 MYRIPQ8NFW9 859 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CREB3L4Q8TEY5 395 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 SLCO2A1Q92959 643 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 KIAA1191Q96A73 305 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CFAP36Q96G28 342 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 PDLIM2Q96JY6 352 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 RUNDC3BQ96NL0 473 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 OSBPL9Q96SU4 736 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 ROGDIQ9GZN7 287 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 KLHL31Q9H511 634 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 NT5DC2Q9H857 520 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CNOT10Q9H9A5 744 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 COPS7BQ9H9Q2 264 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 ADAP2Q9NPF8 381 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CTNNAL1Q9UBT7 734 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 OARD1Q9Y530 152 aa10.36□□□□□ -0.75
UBE2D3-219ENST00000505207 CACNA1CQ13936 2221 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 FBN2P35556 2912 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 OR14I1A6ND48 311 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 FAM47E-STBD1D6RA91 191 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 BCKDKO14874 412 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CLGNO14967 610 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ERI3O43414 337 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CLEC3AO75596 197 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 IFNA16P05015 189 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ZNF37AP17032 561 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ELK3P41970 407 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ARL4CP56559 192 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 PPIAP62937 165 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CCZ1BP86790 482 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CCZ1P86791 482 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 MGAT5Q09328 741 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 HYAL2Q12891 473 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 SERTAD2Q14140 314 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CDSNQ15517 529 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ELAVL1Q15717 326 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 HIST2H2ACQ16777 129 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 PPP1R3AQ16821 1122 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CMPK2Q5EBM0 449 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 NDUFAF5Q5TEU4 345 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 HIST2H2AA3Q6FI13 130 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 HSDL2Q6YN16 418 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 GK5Q6ZS86 529 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 NCCRP1Q6ZVX7 275 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 FGD2Q7Z6J4 655 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 SCUBE1Q8IWY4 988 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 KLHDC8AQ8IYD2 350 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 CLYBLQ8N0X4 340 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ACBD4Q8NC06 268 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 MORN4Q8NDC4 146 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 PSD4Q8NDX1 1056 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 SRFBP1Q8NEF9 429 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 OR5L2Q8NGL0 311 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 NCLNQ969V3 563 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 SERINC2Q96SA4 455 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 TREX2Q9BQ50 279 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 ZNF559Q9BR84 538 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 SPNS1Q9H2V7 528 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 PRM3Q9NNZ6 103 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 GPRC5BQ9NZH0 403 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 KCMF1Q9P0J7 381 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 SPACA6W5XKT8 324 aa10.35□□□□□ -0.75
UBE2D3-219ENST00000505207 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 CDC7O00311 574 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 ZNHIT1O43257 154 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 CTNSO60931 367 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 OR2J2O76002 312 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 PDE9AO76083 593 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 TNNI3P19429 210 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 CNR1P21554 472 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 RFC3P40938 356 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 MTTPP55157 894 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 GPR85P60893 370 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 PMPCAQ10713 525 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 STX4Q12846 297 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 RUNX2Q13950 521 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 SLBPQ14493 270 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 PAGE2BQ5JRK9 111 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 CDKL4Q5MAI5 379 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 STEAP4Q687X5 459 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 OPN5Q6U736 354 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 IL20RBQ6UXL0 311 aa10.34□□□□□ -0.75
UBE2D3-219ENST00000505207 SLCO4C1Q6ZQN7 724 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms