RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PLLPQ9Y342 182 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 PCDHGB7Q9Y5F8 929 aa17.17■□□□□ 0.34
PDLIM7-209ENST00000503346 NSG1A0A0A6YYJ2 146 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 CCDC151A5D8V7 595 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 A6NL46 340 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 K7EM74 188 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 CPA3P15088 417 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 HIST1H1TP22492 207 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 ATP5A1P25705 553 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 TSFMP43897 325 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 NEK2P51955 445 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 RAB38P57729 211 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 NAA20P61599 178 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 EEF1A2Q05639 463 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 LCP2Q13094 533 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 CUL3Q13618 768 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 MYBPC3Q14896 1274 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 PCOLCEQ15113 449 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 KRT71Q3SY84 523 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 QSOX2Q6ZRP7 698 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 CCDC63Q8NA47 563 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 RGMAQ96B86 450 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 NUDT9Q9BW91 350 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 GSTO2Q9H4Y5 243 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF160Q9HCG1 818 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 LYRM4Q9HD34 91 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 ZNF71Q9NQZ8 489 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 RIC8BQ9NVN3 520 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 OXSMQ9NWU1 459 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 GPR83Q9NYM4 423 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 DAPP1Q9UN19 280 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 PIEZO2Q9H5I5 2752 aa17.16■□□□□ 0.34
PDLIM7-209ENST00000503346 BSNQ9UPA5 3926 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ATRXP46100 2492 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 FAM227AF5H4B4 570 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 SAP18O00422 153 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 RTCAO00442 366 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 PLPP1O14494 284 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 KLHL41O60662 606 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 B4GALT2O60909 372 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 SH3BGRLO75368 114 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ERLIN1O75477 346 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 PDGFAP04085 211 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 PGDP52209 483 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 LIM2P55344 173 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 Q0VFX4 171 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 IFT88Q13099 833 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ABRAXAS2Q15018 415 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 NSDHLQ15738 373 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 AP5B1Q2VPB7 878 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 OR4C11Q6IEV9 310 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 LANCL3Q6ZV70 420 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 GPRIN3Q6ZVF9 776 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 CPEB2Q7Z5Q1 589 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ANKRD37Q7Z713 158 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ACOT4Q8N9L9 421 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 TSLPQ969D9 159 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ZIM3Q96PE6 472 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 SMC6Q96SB8 1091 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 SERPINI1Q99574 410 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 SMAD5Q99717 465 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 IQCGQ9H095 443 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 ELOVL6Q9H5J4 265 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 KCMF1Q9P0J7 381 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 SENP1Q9P0U3 644 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 MMACHCQ9Y4U1 282 aa17.15■□□□□ 0.34
PDLIM7-209ENST00000503346 CCDC88CQ9P219 2028 aa17.14■□□□□ 0.34
PDLIM7-209ENST00000503346 KALRNO60229 2985 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 CYR61O00622 381 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 PRMT3O60678 531 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 OR4F21O95013 312 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 SEMA3DO95025 777 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ETHE1O95571 254 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 NR1D1P20393 614 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ITGA3P26006 1051 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 SSR2P43308 183 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 RAP1GDS1P52306 607 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 PKNOX1P55347 436 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 NFATC3Q12968 1075 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 RCN2Q14257 317 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 BEND6Q5SZJ8 279 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 VWA5B1Q5TIE3 1220 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 LIPMQ5VYY2 423 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 LRIG3Q6UXM1 1119 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 CROCCP2Q86T23 111 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ARMC2Q8NEN0 867 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 IMMP1LQ96LU5 166 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 WDR77Q9BQA1 342 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 TUBB6Q9BUF5 446 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ZNF717Q9BY31 904 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 SLC29A3Q9BZD2 475 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ZNF552Q9H707 407 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 PRDM9Q9NQV7 894 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 SNX6Q9UNH7 406 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 ZNF451Q9Y4E5 1061 aa17.14■□□□□ 0.33
PDLIM7-209ENST00000503346 IGKV3D-11A0A0A0MRZ8 115 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 RGS16O15492 202 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 SERPINA7P05543 415 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms