RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 PTRH2Q9Y3E5 179 aaKnown RBP1.04□□□□□ -2.24
SGMS1-205ENST00000498514 CFAP65Q6ZU64 1925 aaKnown RBP1.04□□□□□ -2.24
SGMS1-205ENST00000498514 CHD8Q9HCK8 2581 aa1.04□□□□□ -2.24
SGMS1-205ENST00000498514 MYO10Q9HD67 2058 aa1.04□□□□□ -2.24
SGMS1-205ENST00000498514 TNS2Q63HR2 1409 aa1.04□□□□□ -2.24
SGMS1-205ENST00000498514 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
SGMS1-205ENST00000498514 UBR4Q5T4S7 5183 aa1.04□□□□□ -2.24
SGMS1-205ENST00000498514 MKI67P46013 3256 aaKnown RBP1.04□□□□□ -2.24
SGMS1-205ENST00000498514 USP24Q9UPU5 2620 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 A0A0U1RQK1 487 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 KIR2DS1A0A191URI9 304 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 B4DXG7 233 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 PTGES3LE9PB15 166 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 PTGESO14684 152 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 SNAI2O43623 268 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 ANGPTL1O95841 491 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 IGHG3P01860 377 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 MAPK4P31152 587 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 DUTP33316 252 aaKnown RBP1.03□□□□□ -2.24
SGMS1-205ENST00000498514 RBMXP38159 391 aaKnown RBP1.03□□□□□ -2.24
SGMS1-205ENST00000498514 HADHAP40939 763 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 EFNA3P52797 238 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 CLDN17P56750 224 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 RIPPLY3P57055 190 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 CACNG1Q06432 222 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 KIR2DS1Q14954 304 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 PPP1R3AQ16821 1122 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 CNPY1Q3B7I2 92 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 ASPHD2Q6ICH7 369 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 SCARA5Q6ZMJ2 495 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 ZNF491Q8N8L2 437 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 CFAP61Q8NHU2 1237 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 RBM41Q96IZ5 413 aaKnown RBP1.03□□□□□ -2.24
SGMS1-205ENST00000498514 TBATAQ96M53 351 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 CASD1Q96PB1 797 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 PCDHB18PQ96TA0 734 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 FEVQ99581 238 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 SH3GLB2Q9NR46 395 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 EIF2B3Q9NR50 452 aaKnown RBP1.03□□□□□ -2.24
SGMS1-205ENST00000498514 PRUNE2Q8WUY3 3088 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 NESP48681 1621 aa1.03□□□□□ -2.24
SGMS1-205ENST00000498514 TEP1Q99973 2627 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 MCF2LO15068 1137 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 KALRNO60229 2985 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 RECQL5O94762 991 aaPredicted RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 HSPB1P04792 205 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 GOT1P17174 413 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 CTNNA2P26232 953 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 PSMB10P40306 273 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 NRIP1P48552 1158 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 EVCP57679 992 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 POLR2LP62875 67 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 RBBP4Q09028 425 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 IL17AQ16552 155 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 RBBP7Q16576 425 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 PAN3Q58A45 887 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 ZNF658Q5TYW1 1059 aaPredicted RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 NOL8Q76FK4 1167 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 TRMT11Q7Z4G4 463 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 PRSS35Q8N3Z0 413 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 CCDC63Q8NA47 563 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 NTNG2Q96CW9 530 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 BARD1Q99728 777 aaKnown RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 CPNE1Q99829 537 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 NMUR1Q9HB89 426 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 DNAJC4Q9NNZ3 241 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 BAZ1AQ9NRL2 1556 aaPredicted RBP1.02□□□□□ -2.25
SGMS1-205ENST00000498514 TBC1D22BQ9NU19 505 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 RNF24Q9Y225 148 aa1.02□□□□□ -2.25
SGMS1-205ENST00000498514 CELSR3Q9NYQ7 3312 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 DNAH12Q6ZR08 3092 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 ERCC6Q03468 1493 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 MAST4O15021 2626 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 USP9XQ93008 2570 aaPredicted RBP1.01□□□□□ -2.25
SGMS1-205ENST00000498514 TRIM77I1YAP6 450 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 KIF5CO60282 957 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 DUSP14O95147 198 aaKnown RBP1.01□□□□□ -2.25
SGMS1-205ENST00000498514 MT-ND2P03891 347 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 TOP1P11387 765 aaKnown RBP1.01□□□□□ -2.25
SGMS1-205ENST00000498514 ZNF823P16415 610 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 KRT32Q14532 448 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 MPPED2Q15777 294 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 SGCBQ16585 318 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 LRRC37A5PQ49AS3 106 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 KPRPQ5T749 579 aaPredicted RBP1.01□□□□□ -2.25
SGMS1-205ENST00000498514 KRT39Q6A163 491 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 TTC27Q6P3X3 843 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 LRRC31Q6UY01 552 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 GCNT7Q6ZNI0 430 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 CCDC71Q8IV32 467 aaPredicted RBP1.01□□□□□ -2.25
SGMS1-205ENST00000498514 SMAP1Q8IYB5 467 aaPredicted RBP1.01□□□□□ -2.25
SGMS1-205ENST00000498514 ZNF786Q8N393 782 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 SAMD12Q8N8I0 201 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 OR13F1Q8NGS4 319 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 UCMAQ8WVF2 138 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 ZNF622Q969S3 477 aaKnown RBP eCLIP1.01□□□□□ -2.258e-8■■■■■ 27.5
SGMS1-205ENST00000498514 OR5M11Q96RB7 305 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 SLC26A6Q9BXS9 759 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 CCSER1Q9C0I3 900 aa1.01□□□□□ -2.25
SGMS1-205ENST00000498514 NMUR2Q9GZQ4 415 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms