RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 NAGAP17050 411 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DPP4P27487 766 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HTR2AP28223 471 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IL12BP29460 328 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CASP1P29466 404 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HSD17B3P37058 310 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TALDO1P37837 337 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CTSKP43235 329 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HTR6P50406 440 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF140P52738 457 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 UCNP55089 124 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CDH4P55283 916 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SESN2P58004 480 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ESRRGP62508 458 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GNB2P62879 340 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 POU6F2P78424 691 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC6A3Q01959 620 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLFN5Q08AF3 891 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF844Q08AG5 666 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PDK3Q15120 406 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SHHQ15465 462 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NR0B2Q15466 257 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 USF2Q15853 346 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 KCNA10Q16322 511 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ARHGAP15Q53QZ3 475 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LCE2CQ5TA81 110 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF691Q5VV52 312 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MEDAGQ5VYS4 303 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM111BQ6SJ93 734 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RASSF6Q6ZTQ3 369 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF771Q7L3S4 317 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 KRTAP19-1Q8IUB9 90 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TTC30BQ8N4P2 665 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 STXBP6Q8NFX7 210 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FNDC8Q8TC99 324 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GPR119Q8TDV5 335 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CREB3L4Q8TEY5 395 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GDPD5Q8WTR4 605 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TSKUQ8WUA8 353 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LZICQ8WZA0 190 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EEF1AKMT3Q96AZ1 226 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DDIT4LQ96D03 193 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MASTLQ96GX5 879 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TEPSINQ96N21 525 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TBCBQ99426 244 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CCDC94Q9BW85 323 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 OSBPL11Q9BXB4 747 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC12A5Q9H2X9 1139 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IKZF5Q9H5V7 419 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PNO1Q9NRX1 252 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 AATFQ9NY61 560 aaKnown RBP eCLIP1.36□□□□□ -2.19
XRN1-214ENST00000498077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CD274Q9NZQ7 290 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 VPS54Q9P1Q0 977 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KLHL9Q9P2J3 617 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DIMT1Q9UNQ2 313 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 AURKCQ9UQB9 309 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RRP7AQ9Y3A4 280 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ADGRF5Q8IZF2 1346 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A0A6YYK5 440 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A1W2PPL8 197 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 A8MXE2 369 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CASQ2O14958 399 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SSNA1O43805 119 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SCO2O43819 266 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CLEC3AO75596 197 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NDUFB10O96000 172 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LCATP04180 440 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SERPINE1P05121 402 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HBQ1P09105 142 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 C6orf222P0C671 652 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CD8BP10966 210 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC2A4P14672 509 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IL2RBP14784 551 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IFNGR1P15260 489 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF250P15622 560 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TPSB2P20231 275 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 COMTP21964 271 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EEF1GP26641 437 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 HLA-DMAP28067 261 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HTR1EP28566 365 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR10J1P30954 320 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 UGT1A5P35504 534 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HAAOP46952 286 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 QARSP47897 775 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ZNF41P51814 821 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 CSNK2A1P68400 391 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 PAX2Q02962 417 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TP53BP2Q13625 1128 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KIAA0141Q14154 515 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 KIR2DS1Q14954 304 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MFSD13AQ14CX5 517 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TGIF1Q15583 401 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TPSAB1Q15661 275 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CHRNA6Q15825 494 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CLEC12BQ2HXU8 276 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FIGNQ5HY92 759 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GFI1BQ5VTD9 330 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HGSNATQ68CP4 663 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms