RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PTGS2P35354 604 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 HSD17B7P56937 341 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 RAB38P57729 211 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 SLBPQ14493 270 aaKnown RBP eCLIP20.58■□□□□ 0.89
HDDC3-203ENST00000494993 TMIGD1Q6UXZ0 262 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 MDGA2Q7Z553 956 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 CEP97Q8IW35 865 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 KLHL7Q8IXQ5 586 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 ZFP62Q8NB50 900 aaPredicted RBP20.58■□□□□ 0.89
HDDC3-203ENST00000494993 CA5BP1Q8WTZ4 195 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 CCT6BQ92526 530 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 NCLNQ969V3 563 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 SDCCAG3Q96C92 435 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 SPOCK3Q9BQ16 436 aa20.58■□□□□ 0.89
HDDC3-203ENST00000494993 MED13LQ71F56 2210 aa20.58■□□□□ 0.88
HDDC3-203ENST00000494993 LRIT2A6NDA9 550 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 HS6ST1O60243 411 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 CDC40O60508 579 aaKnown RBP eCLIP20.57■□□□□ 0.88
HDDC3-203ENST00000494993 TFEBP19484 476 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 GSTM2P28161 218 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 GPR143P51810 404 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 HNRNPFP52597 415 aaKnown RBP20.57■□□□□ 0.88
HDDC3-203ENST00000494993 DR1Q01658 176 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 CMPK2Q5EBM0 449 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 CD163Q86VB7 1156 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 KRT78Q8N1N4 520 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 ACBD4Q8NC06 268 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 TMEM52Q8NDY8 209 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 C14orf79Q96F83 325 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 VPS39Q96JC1 886 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 RUNDC3BQ96NL0 473 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 QRFPRQ96P65 431 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 CCDC77Q9BR77 488 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 ENKD1Q9H0I2 346 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 NT5DC2Q9H857 520 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 MOCS1Q9NZB8 636 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 COQ3Q9NZJ6 369 aa20.57■□□□□ 0.88
HDDC3-203ENST00000494993 MRPS33Q9Y291 106 aaKnown RBP20.57■□□□□ 0.88
HDDC3-203ENST00000494993 A0A088AWK7 358 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 CLDN4O14493 209 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 B3GALT2O43825 422 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 SEC31AO94979 1220 aaKnown RBP20.56■□□□□ 0.88
HDDC3-203ENST00000494993 ZNF10P21506 573 aaPredicted RBP20.56■□□□□ 0.88
HDDC3-203ENST00000494993 SSR4P51571 173 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 GPR85P60893 370 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 SLC13A2Q13183 592 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 FASTKD3Q14CZ7 662 aaKnown RBP20.56■□□□□ 0.88
HDDC3-203ENST00000494993 ZNF595Q8IYB9 648 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 FAM47BQ8NA70 645 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 FBXO36Q8NEA4 188 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 SEC16BQ96JE7 1060 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 RHOJQ9H4E5 214 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 POPDC3Q9HBV1 291 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 ADAP2Q9NPF8 381 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 TIMMDC1Q9NPL8 285 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 YARS2Q9Y2Z4 477 aaKnown RBP20.56■□□□□ 0.88
HDDC3-203ENST00000494993 C2CD3Q4AC94 2353 aa20.56■□□□□ 0.88
HDDC3-203ENST00000494993 NCF1BA6NI72 391 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 NCF1CA8MVU1 366 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 PRKNO60260 465 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 CLEC3AO75596 197 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 ZFAND5O76080 213 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 NCF1P14598 390 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 KRTAP10-9P60411 292 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 PDIA2Q13087 525 aaKnown RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 TGFBIQ15582 683 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 ADPRMQ3LIE5 342 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 TRIM40Q6P9F5 258 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 OR2L5Q8NG80 312 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 CHTF18Q8WVB6 975 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 CAPZA3Q96KX2 299 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 TMEM79Q9BSE2 394 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 MCMBPQ9BTE3 642 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 CAPS2Q9BXY5 557 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 PITHD1Q9GZP4 211 aaPredicted RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 PLSCR2Q9NRY7 297 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 TRMT1Q9NXH9 659 aaKnown RBP20.55■□□□□ 0.88
HDDC3-203ENST00000494993 NSMCE4AQ9NXX6 385 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 GPRC5BQ9NZH0 403 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 ITGB1BP2Q9UKP3 347 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 HRH3Q9Y5N1 445 aa20.55■□□□□ 0.88
HDDC3-203ENST00000494993 HIVEP1P15822 2718 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 SYNDIG1LA6NDD5 238 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 ANKDD1BA6NHY2 528 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 E7ESA3 106 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 TP73O15350 636 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 TBX6O95947 436 aaPredicted RBP20.54■□□□□ 0.88
HDDC3-203ENST00000494993 TUBB4AP04350 444 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 HPDP32754 393 aaPredicted RBP20.54■□□□□ 0.88
HDDC3-203ENST00000494993 PLA2G16P53816 162 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 ELAVL1Q15717 326 aaKnown RBP20.54■□□□□ 0.88
HDDC3-203ENST00000494993 MEX3BQ6ZN04 569 aaKnown RBP20.54■□□□□ 0.88
HDDC3-203ENST00000494993 VN1R5Q7Z5H4 357 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 MARVELD2Q8N4S9 558 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 PSD4Q8NDX1 1056 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 OR52N2Q8NGI0 321 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 SERINC2Q96SA4 455 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 CSF3RQ99062 836 aa20.54■□□□□ 0.88
HDDC3-203ENST00000494993 TREX2Q9BQ50 279 aaPredicted RBP20.54■□□□□ 0.88
HDDC3-203ENST00000494993 TRIM31Q9BZY9 425 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms