RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PRKAA2P54646 552 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 HERVK_113P63132 956 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 ZRSR2Q15696 482 aaKnown RBP16.14■□□□□ 0.17
SNX17-209ENST00000494893 CPSF6Q16630 551 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX17-209ENST00000494893 LANCL3Q6ZV70 420 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 MYLK4Q86YV6 388 aaPredicted RBP16.14■□□□□ 0.17
SNX17-209ENST00000494893 C10orf107Q8IVU9 208 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 TRIM42Q8IWZ5 723 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 FDCSPQ8NFU4 85 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 C9orf43Q8TAL5 461 aaPredicted RBP16.14■□□□□ 0.17
SNX17-209ENST00000494893 UBE2E3Q969T4 207 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 CCDC126Q96EE4 140 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 MECRQ9BV79 373 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 NUDT9Q9BW91 350 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 ERVK-6Q9BXR3 956 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 SLC25A18Q9H1K4 315 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 OR51B5Q9H339 312 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 DMRT3Q9NQL9 472 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 ZNF71Q9NQZ8 489 aaPredicted RBP16.14■□□□□ 0.17
SNX17-209ENST00000494893 OXSMQ9NWU1 459 aa16.14■□□□□ 0.17
SNX17-209ENST00000494893 A6NL46 340 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 RTCAO00442 366 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 CDC123O75794 336 aaPredicted RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 ETHE1O95571 254 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 FHP07954 510 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 NEFHP12036 1026 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 ACPPP15309 386 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 IMPDH1P20839 514 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 CERS1P27544 350 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 NEK2P51955 445 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 CCNG1P51959 295 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 RRADP55042 308 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 SOX8P57073 446 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 RPS13P62277 151 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 EEF1A2Q05639 463 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 RAPSNQ13702 412 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 DDX39BQ13838 428 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 PCOLCEQ15113 449 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 MINDY4Q4G0A6 757 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 DEPDC1Q5TB30 811 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 TCTN3Q6NUS6 607 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 NIPAL1Q6NVV3 410 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 LETMD1Q6P1Q0 360 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 RGS9BPQ6ZS82 235 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 TMEM52Q8NDY8 209 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 OR4F6Q8NGB9 312 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 RAB3IL1Q8TBN0 382 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 TSLPQ969D9 159 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 TBC1D20Q96BZ9 403 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 L3HYPDHQ96EM0 354 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 FER1L6-AS2Q96M78 137 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 OR1F2PQ96R84 312 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 MTERF1Q99551 399 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 SORBS1Q9BX66 1292 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 CLK4Q9HAZ1 481 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 PCDHGA9Q9Y5G4 932 aaKnown RBP16.13■□□□□ 0.17
SNX17-209ENST00000494893 PCDHGA11Q9Y5H2 935 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 NUP210LQ5VU65 1888 aa16.13■□□□□ 0.17
SNX17-209ENST00000494893 IGHV1-45A0A0A0MS14 117 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 MAGEB17A8MXT2 336 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 MKRN2OSH3BPM6 223 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 SAP18O00422 153 aaKnown RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 TRIM13O60858 407 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 BGNP21810 368 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 SERPINB1P30740 379 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 LSP1P33241 339 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 PIK3CBP42338 1070 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 HNRNPFP52597 415 aaKnown RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 DNAJB13P59910 316 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 GNGT1P63211 74 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 CLCQ05315 142 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 GGTA1PQ4G0N0 100 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 KHDRBS2Q5VWX1 349 aaKnown RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 TRIM40Q6P9F5 258 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 SLC22A9Q8IVM8 553 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 GALNT16Q8N428 558 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 PLPP5Q8NEB5 264 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 LRRC8CQ8TDW0 803 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 TRPC4APQ8TEL6 797 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 SREK1Q8WXA9 508 aaKnown RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 ZNF75CPQ92670 426 aaPredicted RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 ATP6V1E2Q96A05 226 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 WDR77Q9BQA1 342 aaPredicted RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 SLC25A23Q9BV35 468 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 ZNF717Q9BY31 904 aaPredicted RBP16.12■□□□□ 0.17
SNX17-209ENST00000494893 ZNF700Q9H0M5 742 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 GSTO2Q9H4Y5 243 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 MANSC1Q9H8J5 431 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 ZNF160Q9HCG1 818 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 CLDN16Q9Y5I7 305 aa16.12■□□□□ 0.17
SNX17-209ENST00000494893 IGHV3-20A0A0C4DH32 117 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 TGFBR3LH3BV60 316 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 KLF11O14901 512 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 SHOX2O60902 331 aaPredicted RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 B4GALT2O60909 372 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 SUPT7LO94864 414 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 SCELO95171 688 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 HPP00738 406 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 CELA2AP08217 269 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 CYC1P08574 325 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms