RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 NEIL3Q8TAT5 605 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CCM2Q9BSQ5 444 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 PPIL3Q9H2H8 161 aaKnown RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 TP63Q9H3D4 680 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 RPS10P5Q9NQ39 176 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 MS4A12Q9NXJ0 267 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ABRACLQ9P1F3 81 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 COL20A1Q9P218 1284 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 PRKYO43930 277 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ATE1O95260 518 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CFIP05156 583 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 MRPL3P09001 348 aaKnown RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 NRLP54845 237 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 RSU1Q15404 277 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CTC1Q2NKJ3 1217 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 KANK2Q63ZY3 851 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 TMEM225Q6GV28 225 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 RPL13AP3Q6NVV1 102 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CFAP77Q6ZQR2 320 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 Q8N402 240 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 C1orf52Q8N6N3 182 aaKnown RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 SLAIN1Q8ND83 568 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 NKD2Q969F2 451 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF419Q96HQ0 510 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 OR2M4Q96R27 311 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 TWNKQ96RR1 684 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 B3GNT5Q9BYG0 378 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 SLC28A3Q9HAS3 691 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 GCM1Q9NP62 436 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 KCNMB3Q9NPA1 279 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 IL36AQ9UHA7 158 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 POU2F3Q9UKI9 436 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 TP53TG5Q9Y2B4 290 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 HCN4Q9Y3Q4 1203 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 HAS3O00219 553 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 GOSR2O14653 212 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 WNT9AO14904 365 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CBSLP0DN79 551 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CHRNB2P17787 502 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 VIPR1P32241 457 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 CBSP35520 551 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 TAS2R39P59534 338 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 GALK2Q01415 458 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 GPR33Q49SQ1 333 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 BEST4Q8NFU0 473 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF420Q8TAQ5 688 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ITFG2Q969R8 447 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ESAMQ96AP7 390 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 INPP4AQ96PE3 977 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-221ENST00000493795 SLC32A1Q9H598 525 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 EBF2Q9HAK2 575 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ZDHHC3Q9NYG2 299 aa7.6□□□□□ -1.19
BRCA1-221ENST00000493795 ANKRD34BA5PLL1 514 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 TOXO94900 526 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ACP5P13686 325 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF182P17025 639 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 BDKRB2P30411 391 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 S100A7P31151 101 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 SP3Q02447 781 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 MEP1AQ16819 746 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 EXOC3L2Q2M3D2 409 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 TMEM236Q5W0B7 351 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 FRG2Q64ET8 278 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 LRRC55Q6ZSA7 311 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 BANPQ8N9N5 519 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ANKK1Q8NFD2 765 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 TSTD1Q8NFU3 115 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 OR5H2Q8NGV7 314 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 NPLOC4Q8TAT6 608 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 CANT1Q8WVQ1 401 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 DAZAP1Q96EP5 407 aaKnown RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 SAMD11Q96NU1 681 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 CDK15Q96Q40 435 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 FRG2BQ96QU4 278 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 SECISBP2Q96T21 854 aaKnown RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 CCDC32Q9BV29 185 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 FUNDC2Q9BWH2 189 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 TTTY10Q9BZA0 68 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 OSBPL7Q9BZF2 842 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 TSPAN10Q9H1Z9 355 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 FOLH1BQ9HBA9 442 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 HHATLQ9HCP6 504 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ARMC1Q9NVT9 282 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 FAM120CQ9NX05 1096 aaKnown RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 PAQR5Q9NXK6 330 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ZFR2Q9UPR6 939 aaKnown RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 SPATA31E1Q6ZUB1 1445 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 hCG_1807616A0A1W2PRN6 198 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 UNC119BA6NIH7 251 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 B4GALT5O43286 388 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 LRRTM2O43300 516 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 CKMT2P17540 419 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 ENDOUP21128 410 aaKnown RBP7.59□□□□□ -1.19
BRCA1-221ENST00000493795 GGT2P36268 569 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 CDKN2BP42772 138 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 INHBEP58166 350 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 RHBDL3P58872 404 aa7.59□□□□□ -1.19
BRCA1-221ENST00000493795 HYAL2Q12891 473 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms