RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 TBATAQ96M53 351 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 QKIQ96PU8 341 aaKnown RBP eCLIP4.74□□□□□ -1.65
CCNB3-208ENST00000493507 PANX2Q96RD6 677 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 MCCC1Q96RQ3 725 aaPredicted RBP4.74□□□□□ -1.65
CCNB3-208ENST00000493507 NUDCD1Q96RS6 583 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 IL12RB2Q99665 862 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 SEMA3CQ99985 751 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 NCAPGQ9BPX3 1015 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 MLPHQ9BV36 600 aaPredicted RBP4.74□□□□□ -1.65
CCNB3-208ENST00000493507 TDRD1Q9BXT4 1180 aaKnown RBP4.74□□□□□ -1.65
CCNB3-208ENST00000493507 GPR63Q9BZJ6 419 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 CATSPERBQ9H7T0 1116 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 SIRT3Q9NTG7 399 aaPredicted RBP4.74□□□□□ -1.65
CCNB3-208ENST00000493507 CD84Q9UIB8 345 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 SLC13A4Q9UKG4 626 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 SCML1Q9UN30 329 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 GTF2A1LQ9UNN4 478 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 OR1A2Q9Y585 309 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 ALG6Q9Y672 507 aa4.74□□□□□ -1.65
CCNB3-208ENST00000493507 SMG1Q96Q15 3661 aaKnown RBP4.74□□□□□ -1.65
CCNB3-208ENST00000493507 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 CXorf51AA0A1B0GTR3 108 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 FAM90A10PA6NDY2 464 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 FAM157AC9JC47 383 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 STMND1H3BQB6 276 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 TLR4O00206 839 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 RNASEH1O60930 286 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 PALMO75781 387 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 RECQL5O94762 991 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 POP4O95707 220 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 MT-CYBP00156 380 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 PCCBP05166 539 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 POLBP06746 335 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 HNRNPA2B1P22626 353 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 DGKAP23743 735 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 PTPN3P26045 913 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 CTNNA2P26232 953 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 CTNNA1P35221 906 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 SSR1P43307 286 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 MAGEA1P43355 309 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 RXRGP48443 463 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 CSNK1DP48730 415 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 IFI35P80217 286 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 SLC20A2Q08357 652 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 MSLNQ13421 630 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 PDE1CQ14123 709 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 KRT81Q14533 505 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 UGP2Q16851 508 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 ZNF260Q3ZCT1 412 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 SETMARQ53H47 684 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 BOLA3Q53S33 107 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 ARMC12Q5T9G4 340 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 HES3Q5TGS1 186 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 FAM46CQ5VWP2 391 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 AWAT2Q6E213 333 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 HEPHL1Q6MZM0 1159 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 KIAA1161Q6NSJ0 714 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 GUSBP11Q6P575 273 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 Q6ZSR6 202 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 TECPR1Q7Z6L1 1165 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 DSG4Q86SJ6 1040 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 ADGRG6Q86SQ4 1221 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 NT5DC3Q86UY8 548 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 NRROSQ86YC3 692 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 SLC35F3Q8IY50 421 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 KATNAL2Q8IYT4 538 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 HORMAD2Q8N7B1 307 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 LSM14AQ8ND56 463 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 DNAAF1Q8NEP3 725 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 RFWD2Q8NHY2 731 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 GABPB2Q8TAK5 448 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 NSMCE1Q8WV22 266 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 INPP5DQ92835 1189 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 FGF11Q92914 225 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 TSACCQ96A04 125 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 DTD2Q96FN9 168 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 NAF1Q96HR8 494 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 ZNF599Q96NL3 588 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 TSGA13Q96PP4 275 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 WDR77Q9BQA1 342 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 SLC17A9Q9BYT1 436 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 MRPL47Q9HD33 250 aaKnown RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 SMARCAL1Q9NZC9 954 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 RCOR3Q9P2K3 495 aaPredicted RBP4.73□□□□□ -1.65
CCNB3-208ENST00000493507 NLKQ9UBE8 527 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 CHKBQ9Y259 395 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 NCKAP1Q9Y2A7 1128 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 PCDHGA1Q9Y5H4 931 aa4.73□□□□□ -1.65
CCNB3-208ENST00000493507 A0A096LPK6 155 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 A0A0J9YYE9 177 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 GOLGA6L10A0A0M3HER8 536 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 SPTY2D1-AS1A0A0U1RR47 76 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 C17orf113A0A1B0GUU1 675 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 RPS10-NUDT3A0A1W2PQS6 291 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 MACROD2A1Z1Q3 448 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 ZSCAN5CA6NGD5 496 aaPredicted RBP4.72□□□□□ -1.65
CCNB3-208ENST00000493507 CD8B2A6NJW9 211 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 USP27XA6NNY8 438 aa4.72□□□□□ -1.65
CCNB3-208ENST00000493507 ZNF487B1APH4 448 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms