RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 C3orf18Q9UK00 162 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 MKL2Q9ULH7 1088 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 ACTL7BQ9Y614 415 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KCNMB2Q9Y691 235 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SPACA6W5XKT8 324 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 ZNF860A6NHJ4 632 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 TM9SF1O15321 606 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 CNOT3O75175 753 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 ULK1O75385 1050 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 BMP10O95393 424 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 ENO1P06733 434 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 RNH1P13489 461 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 JAK1P23458 1154 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 MMP11P24347 488 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 HNRNPH1P31943 449 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 NEK2P51955 445 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 RPS13P62277 151 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 TRAF3Q13114 568 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 ADPRMQ3LIE5 342 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 MINDY4Q4G0A6 757 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 GGTA1PQ4G0N0 100 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 ATP1A1-AS1Q5TC04 95 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 OR4C11Q6IEV9 310 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 ABHD17CQ6PCB6 329 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 MED25Q71SY5 747 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 VN1R5Q7Z5H4 357 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 PDSS2Q86YH6 399 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 NUDCD3Q8IVD9 361 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 C10orf107Q8IVU9 208 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 SELENOMQ8WWX9 145 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 TBC1D20Q96BZ9 403 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 PEX11GQ96HA9 241 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 CNDP1Q96KN2 507 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 SPSB2Q99619 263 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 OR51B5Q9H339 312 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 EML4Q9HC35 981 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 MID1IP1Q9NPA3 183 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 ACSS2Q9NR19 701 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 SLC17A7Q9P2U7 560 aa12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-214ENST00000491288 A0A0G2JN53 185 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 MAGEB17A8MXT2 336 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 IDSB3KWA1 339 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 PPP6CO00743 305 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 CLDN4O14493 209 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 TYROBPO43914 113 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 ESRRBO95718 433 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 B3GALT4O96024 378 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 UMODP07911 640 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 CREB1P16220 341 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 ALDH3A1P30838 453 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 SSR2P43308 183 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 TSFMP43897 325 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 CD97P48960 835 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 ARFIP1P53367 373 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 OLR1P78380 273 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 CUL3Q13618 768 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 IL10RAQ13651 578 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 TUBB8Q3ZCM7 444 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 FAM69BQ5VUD6 431 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 ADNP2Q6IQ32 1131 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 CDYL2Q8N8U2 506 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 TMEM102Q8N9M5 508 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 OR5T3Q8NGG3 340 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 WDR20Q8TBZ3 569 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 OR1F2PQ96R84 312 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 TRMOQ9BU70 441 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 SLC29A3Q9BZD2 475 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 GSTO2Q9H4Y5 243 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 TMBIM4Q9HC24 238 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 DMRT3Q9NQL9 472 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 PRDM7Q9NQW5 492 aa12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 ZNF71Q9NQZ8 489 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 MRPS33Q9Y291 106 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-214ENST00000491288 FER1L5A0AVI2 2057 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 SAP18O00422 153 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 USP9YO00507 2555 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 KLHL41O60662 606 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 ZWINTO95229 277 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 FHP07954 510 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 CYC1P08574 325 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 FURINP09958 794 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 CCL11P51671 97 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 ACTN3Q08043 901 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 PCLAFQ15004 111 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 TNFAIP8L3Q5GJ75 292 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 HHATQ5VTY9 493 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 FAAH2Q6GMR7 532 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 TCTN3Q6NUS6 607 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 LETMD1Q6P1Q0 360 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 CYP20A1Q6UW02 462 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 PAGE2Q7Z2X7 111 aa12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 ZC3H7AQ8IWR0 971 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-214ENST00000491288 CA13Q8N1Q1 262 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms