RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 ZBTB11O95625 1053 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 IGHV2-70P01814 119 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 RLN1P04808 185 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 IGKV2-30P06310 120 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 PLA2G4BP0C869 781 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 ATP6V1B1P15313 513 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 LBPP18428 481 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 PSMA3P25788 255 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 LINC00205P59089 165 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 PTENP60484 403 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 MECOMQ03112 1051 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 MBTD1Q05BQ5 628 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 GFPT1Q06210 699 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 CUL3Q13618 768 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 RCN2Q14257 317 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 KIR2DS5Q14953 304 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 TAZQ16635 292 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 LINC00303Q3SY05 128 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 PHLDA2Q53GA4 152 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 SYT14P1Q58G82 188 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 ODF2Q5BJF6 829 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 AWAT2Q6E213 333 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 TMEM182Q6ZP80 229 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 C1QL2Q7Z5L3 287 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 SLC9B2Q86UD5 537 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 TUSC5Q8IXB3 177 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 SLC34A3Q8N130 599 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 CARNMT1Q8N4J0 409 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 CPSF7Q8N684 471 aaKnown RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 ATAD1Q8NBU5 361 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 OR13J1Q8NGT2 312 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 VANGL1Q8TAA9 524 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 OCC1Q8TAD7 63 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 MGARPQ8TDB4 240 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 ZNF707Q96C28 371 aaPredicted RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 BICD1Q96G01 975 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 SPATA33Q96N06 139 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 FUT8Q9BYC5 575 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 MINDY3Q9H8M7 445 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 RAVER2Q9HCJ3 691 aaKnown RBP4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 OLFML3Q9NRN5 406 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 ERAP1Q9NZ08 941 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 ITGA11Q9UKX5 1188 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 KNL1Q8NG31 2342 aa4.5□□□□□ -1.69
SSX2IP-208ENST00000490476 TMEM131Q92545 1883 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 DIDO1Q9BTC0 2240 aaKnown RBP4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 SAA2-SAA4A0A096LPE2 208 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 A0A1W2PPW3 197 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 A0A1W2PRB8 838 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 MAGEA13PA6NCF6 341 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 SMTNL1A8MU46 457 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 MPHOSPH10O00566 681 aaKnown RBP4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 GAPDHSO14556 408 aaPredicted RBP4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ST8SIA3O43173 380 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 FMO6PO60774 539 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 OAZ2O95190 189 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 NGFRP08138 427 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 CDK4P11802 303 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 CCNE1P24864 410 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 FUT6P51993 359 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 THOP1P52888 689 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 NAGLUP54802 743 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 CX3CL1P78423 397 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 UGCGQ16739 394 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 MCMDC2Q4G0Z9 681 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ANKRD20A4Q4UJ75 823 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ANKRD20A8PQ5CZ79 823 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ELFN2Q5R3F8 820 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ANKRD20A2Q5SQ80 823 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ANKRD20A1Q5TYW2 823 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ANKRD20A3Q5VUR7 823 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 C11orf63Q6NUN7 778 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 CORO6Q6QEF8 472 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 GBP6Q6ZN66 633 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 C9orf47Q6ZRZ4 202 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 KCTD8Q6ZWB6 473 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 UNC45BQ8IWX7 931 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 TIGD4Q8IY51 512 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 CDK20Q8IZL9 346 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 MUC20Q8N307 709 aaPredicted RBP4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 TRIML1Q8N9V2 468 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 THAP8Q8NA92 274 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 UXS1Q8NBZ7 420 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 FIBINQ8TAL6 211 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 ZNF479Q96JC4 524 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 TMEM204Q9BSN7 226 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 FTHL17Q9BXU8 183 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 SLC2A11Q9BYW1 496 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 PRRG4Q9BZD6 226 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 TM6SF1Q9BZW5 370 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 VN1R1Q9GZP7 353 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 SNX25Q9H3E2 840 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 DNAJC4Q9NNZ3 241 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 KLHL1Q9NR64 748 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 GKN1Q9NS71 199 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 KNSTRNQ9Y448 316 aa4.49□□□□□ -1.69
SSX2IP-208ENST00000490476 COL1A2P08123 1366 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms