RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ACSL6Q9UKU0 697 aa9.76□□□□□ -0.85
SKA1-204ENST00000488454 MRPS2Q9Y399 296 aaKnown RBP9.76□□□□□ -0.85
SKA1-204ENST00000488454 DNAJC15Q9Y5T4 150 aa9.76□□□□□ -0.85
SKA1-204ENST00000488454 SPACA6W5XKT8 324 aa9.76□□□□□ -0.85
SKA1-204ENST00000488454 DCHS1Q96JQ0 3298 aa9.76□□□□□ -0.85
SKA1-204ENST00000488454 SPTBN4Q9H254 2564 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 COL27A1Q8IZC6 1860 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 A0A0G2JN53 185 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 TEX51A0A1B0GUA7 166 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 TMEM233B4DJY2 109 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 TCP11X1B4DZS4 312 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 PSMD12O00232 456 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 PIP5K1BO14986 540 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 GALR3O60755 368 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 MYO1DO94832 1006 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 MED26O95402 600 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 TCN2P20062 427 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 MDH1P40925 334 aaKnown RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 HTR6P50406 440 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 HMGCS1Q01581 520 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 OCRLQ01968 901 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 OCA2Q04671 838 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 ACSM2AQ08AH3 577 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 SLAMF1Q13291 335 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 SLC9A5Q14940 896 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 PDCD2Q16342 344 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 UGT3A2Q3SY77 523 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 SPIN4Q56A73 249 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 ACSM2BQ68CK6 577 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 FAM199XQ6PEV8 388 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 CYP20A1Q6UW02 462 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 RGS9BPQ6ZS82 235 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 RNF165Q6ZSG1 346 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 OVCH1Q7RTY7 1134 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 TIPARPQ7Z3E1 657 aaKnown RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 WDR75Q8IWA0 830 aaKnown RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 ZNF248Q8NDW4 579 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 PIWIL2Q8TC59 973 aaKnown RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 NKD1Q969G9 470 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 C7orf26Q96N11 449 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 EFHD1Q9BUP0 239 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 NPLQ9BXD5 320 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 ACPTQ9BZG2 426 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 CHST8Q9H2A9 424 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 TRPC4Q9UBN4 977 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 ZNF282Q9UDV7 671 aaPredicted RBP9.75□□□□□ -0.85
SKA1-204ENST00000488454 HAO1Q9UJM8 370 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 PTPRBP23467 1997 aa9.75□□□□□ -0.85
SKA1-204ENST00000488454 ZNF860A6NHJ4 632 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 TRPC5OSA6NMA1 111 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 C21orf140B9A014 251 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 RTCAO00442 366 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 PLPP1O14494 284 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 HDAC3O15379 428 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 RRP8O43159 456 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 CHST10O43529 356 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 GUCY1B2O75343 617 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 VPS4BO75351 444 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 SEC22BO75396 215 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 RDH16O75452 317 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 SKAP2O75563 359 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 RSL1D1O76021 490 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 ETHE1O95571 254 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 TBX6O95947 436 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 ONECUT2O95948 504 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 B3GALT4O96024 378 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 ALBP02768 609 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 KLK1P06870 262 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 VIMP08670 466 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 IL10P22301 178 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 HIST1H1TP22492 207 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 ATP5A1P25705 553 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 TLX1P31314 330 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 DLSTP36957 453 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 FOXK2Q01167 660 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 GUCY1A3Q02108 690 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 POU4F2Q12837 409 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 CCNYL2Q5T2Q4 361 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 ATG14Q6ZNE5 492 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 FAM47EQ6ZV65 393 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 PRSS41Q7RTY9 318 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 UBE3DQ7Z6J8 389 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 NUDT13Q86X67 352 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 DTX1Q86Y01 620 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 PDSS2Q86YH6 399 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 METTL4Q8N3J2 472 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 ACOT4Q8N9L9 421 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 OR51Q1Q8NH59 317 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 CHTF18Q8WVB6 975 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 KCNE4Q8WWG9 221 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 GATA6Q92908 595 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 FKBP10Q96AY3 582 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 TUBGCP3Q96CW5 907 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 C19orf60Q96EN9 201 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 NAF1Q96HR8 494 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 METTL2AQ96IZ6 378 aaKnown RBP9.74□□□□□ -0.85
SKA1-204ENST00000488454 PPP3R2Q96LZ3 170 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 GPR87Q9BY21 358 aa9.74□□□□□ -0.85
SKA1-204ENST00000488454 MRPL1Q9BYD6 325 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms