RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 GAL3ST3Q96A11 431 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 VMP1Q96GC9 406 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 PITHD1Q9GZP4 211 aaPredicted RBP14.28□□□□□ -0.12
TRIM50-203ENST00000488217 KCNF1Q9H3M0 494 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 RHOJQ9H4E5 214 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 POPDC3Q9HBV1 291 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 NSMCE4AQ9NXX6 385 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 SCN3AQ9NY46 2000 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 GPRC5BQ9NZH0 403 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 ZNF490Q9ULM2 529 aaPredicted RBP14.28□□□□□ -0.12
TRIM50-203ENST00000488217 CLDN16Q9Y5I7 305 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 OTOGQ6ZRI0 2925 aa14.28□□□□□ -0.12
TRIM50-203ENST00000488217 A0A088AWK7 358 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 E7ESA3 106 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 TFECO14948 347 aaPredicted RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 TAPBPO15533 448 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 HS6ST1O60243 411 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 CTNSO60931 367 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 ZNF10P21506 573 aaPredicted RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 SSTR2P30874 369 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 HPDP32754 393 aaPredicted RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 RFC3P40938 356 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 PLA2G16P53816 162 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 RAB38P57729 211 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 POU4F1Q01851 419 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 BMPR2Q13873 1038 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 SLBPQ14493 270 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 TGFBIQ15582 683 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 GPSM1Q86YR5 675 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 ZNF595Q8IYB9 648 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 CYP4Z2PQ8N1L4 340 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 TMEM132CQ8N3T6 1108 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 SPATA6LQ8N4H0 392 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 ZFP62Q8NB50 900 aaPredicted RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 OR2L5Q8NG80 312 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 FAM57AQ8TBR7 257 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 CA5BP1Q8WTZ4 195 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 NCLNQ969V3 563 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 QRFPRQ96P65 431 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 CCDC77Q9BR77 488 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 MCMBPQ9BTE3 642 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 TRIM31Q9BZY9 425 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 DERL2Q9GZP9 239 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 REXO4Q9GZR2 422 aaKnown RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 TIMMDC1Q9NPL8 285 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 PPT2Q9UMR5 302 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 MTO1Q9Y2Z2 717 aaKnown RBP14.27□□□□□ -0.13
TRIM50-203ENST00000488217 HRH3Q9Y5N1 445 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 AKAP9Q99996 3911 aa14.27□□□□□ -0.13
TRIM50-203ENST00000488217 PDZD2O15018 2839 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 SCN2AQ99250 2005 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 NCF1BA6NI72 391 aaPredicted RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 NCF1CA8MVU1 366 aaPredicted RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 EFCAB8A8MWE9 144 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 CYR61O00622 381 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 CLGNO14967 610 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 TBX6O95947 436 aaPredicted RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 NCF1P14598 390 aaPredicted RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 TFEBP19484 476 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 PPP2R1BP30154 601 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 DEKP35659 375 aaKnown RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 SSR4P51571 173 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 HNRNPFP52597 415 aaKnown RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 GNG11P61952 73 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 FASTKD3Q14CZ7 662 aaKnown RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 ADPRMQ3LIE5 342 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 CMPK2Q5EBM0 449 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 XKR6Q5GH73 641 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 CDKL4Q5MAI5 379 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 TMEM211Q6ICI0 200 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 ABHD17CQ6PCB6 329 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 C16orf47Q6ZP98 133 aaPredicted RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 TCAIMQ8N3R3 496 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 TMEM52Q8NDY8 209 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 SERINC2Q96SA4 455 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 ALOXE3Q9BYJ1 711 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 ENKD1Q9H0I2 346 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 EHD1Q9H4M9 534 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 CNOT10Q9H9A5 744 aaKnown RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 LIN28AQ9H9Z2 209 aaKnown RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 PRDM7Q9NQW5 492 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 DNAJC11Q9NVH1 559 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 COQ3Q9NZJ6 369 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 KCMF1Q9P0J7 381 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 MYOTQ9UBF9 498 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 VTI1BQ9UEU0 232 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 ERVK-11Q9UQG0 969 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 MRPS33Q9Y291 106 aaKnown RBP14.26□□□□□ -0.13
TRIM50-203ENST00000488217 SNX24Q9Y343 169 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 SAR1BQ9Y6B6 198 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 CLCA3PQ9Y6N3 262 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 ADGRG4Q8IZF6 3080 aa14.26□□□□□ -0.13
TRIM50-203ENST00000488217 DCHS2Q6V1P9 2916 aa14.25□□□□□ -0.13
TRIM50-203ENST00000488217 TMEM200CA6NKL6 621 aa14.25□□□□□ -0.13
TRIM50-203ENST00000488217 USP27XA6NNY8 438 aa14.25□□□□□ -0.13
TRIM50-203ENST00000488217 TGFBR3LH3BV60 316 aa14.25□□□□□ -0.13
TRIM50-203ENST00000488217 CCDC188H7C350 402 aa14.25□□□□□ -0.13
TRIM50-203ENST00000488217 CDC40O60508 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms