RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TMEM178AQ8NBL3 297 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 LPCAT1Q8NF37 534 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 GPRC5AQ8NFJ5 357 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 DYRK2Q92630 601 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 BCL2L2Q92843 193 aaPredicted RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 NXPE2Q96DL1 559 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PGLYRP2Q96PD5 576 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 LPAR4Q99677 370 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PRMT1Q99873 361 aaKnown RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 NACAP1Q9BZK3 213 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 C5orf66Q9H5L9 145 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 TBC1D13Q9NVG8 400 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 TMOD3Q9NYL9 352 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 IL36AQ9UHA7 158 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PRDM4Q9UKN5 801 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 KNSTRNQ9Y448 316 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 LRP12Q9Y561 859 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 RGPD2P0DJD1 1756 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 PFASO15067 1338 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 BRD4O60885 1362 aaPredicted RBP4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 UBR3Q6ZT12 1888 aa4.39□□□□□ -1.71
PRPF38A-203ENST00000487160 TNRC6CQ9HCJ0 1690 aaKnown RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM208AQ9UK61 1670 aaKnown RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 CPSF1Q10570 1443 aaKnown RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 KIF13BQ9NQT8 1826 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 TRBV4-1A0A0J9YWV2 114 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM72CH0Y354 149 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PGRMC2O15173 223 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 KIF5CO60282 957 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 AP2A2O94973 939 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 EML2O95834 649 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PAK4O96013 591 aaPredicted RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PNPP00491 289 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 MT-ND3P03897 115 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 YES1P07947 543 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 HMBSP08397 361 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 SBK2P0C263 348 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 SLC2A2P11168 524 aaPredicted RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 CHRNB4P30926 498 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PRELPP51888 382 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 FKBP1BP68106 108 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PTPN14Q15678 1187 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 CDC37Q16543 378 aaPredicted RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 ZNF74Q16587 644 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM72AQ5TYM5 149 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM72DQ6L9T8 149 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 SLC25A47Q6Q0C1 308 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 BTN2A1Q7KYR7 527 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 ASPGQ86U10 573 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 FAM72BQ86X60 149 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 CNTN4Q8IWV2 1026 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 GPC2Q8N158 579 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 SMYD1Q8NB12 490 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 WBP2Q969T9 261 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 NECTIN4Q96NY8 510 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 NEDD4LQ96PU5 975 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 RPF1Q9H9Y2 349 aaKnown RBP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PNPLA3Q9NST1 481 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 MAN2C1Q9NTJ4 1040 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 EPHA6Q9UF33 1036 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PILRBQ9UKJ0 227 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 NCKAP1Q9Y2A7 1128 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 COLEC10Q9Y6Z7 277 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 MON2Q7Z3U7 1717 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 USP6P35125 1406 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
PRPF38A-203ENST00000487160 ARFGEF1Q9Y6D6 1849 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 NFAT5O94916 1531 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 IGHV4-4A0A075B6R2 117 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 A0A087WUV0 522 aaPredicted RBP4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 A0A087X0K7 114 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 MAGEB16A2A368 324 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 C5orf51A6NDU8 294 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 TEX28O15482 410 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 SCO2O43819 266 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 KRT33AO76009 404 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 SEC24AO95486 1093 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 OLFM2O95897 454 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 ELAVL4P26378 380 aaKnown RBP4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 RBMS1P29558 406 aaKnown RBP4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 SRD5A2P31213 254 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 SLC34A1Q06495 639 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 CBX3Q13185 183 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 TEAD2Q15562 447 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 HFEQ30201 348 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 IFI44LQ53G44 452 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 AGAP6Q5VW22 663 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 KCTD11Q693B1 232 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 DHRS11Q6UWP2 260 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 LEKR1Q6ZMV7 388 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 FCRLAQ7L513 359 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 LACC1Q8IV20 430 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 RNASE8Q8TDE3 154 aaKnown RBP4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 ATP6V0A1Q93050 837 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 RFT1Q96AA3 541 aa4.37□□□□□ -1.71
PRPF38A-203ENST00000487160 LGALS12Q96DT0 336 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms