RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 IP6K3Q96PC2 410 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 OR1F2PQ96R84 312 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 SERINC2Q96SA4 455 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 SERPINI1Q99574 410 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 MESP1Q9BRJ9 268 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 ROGDIQ9GZN7 287 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 VN1R1Q9GZP7 353 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 PRDM7Q9NQW5 492 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 P4HTMQ9NXG6 502 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 SLC12A4Q9UP95 1085 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 TIMM22Q9Y584 194 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 HS3ST3B1Q9Y662 390 aa11.18□□□□□ -0.62
HPS4-214ENST00000485842 UQCRHLA0A096LP55 91 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FAM227AF5H4B4 570 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 AGPSO00116 658 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 MASP2O00187 686 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FOXE1O00358 373 aaPredicted RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 PLPP1O14494 284 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 SOCS6O14544 535 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 TM9SF1O15321 606 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 DNAJB5O75953 348 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 ZWINTO95229 277 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 ITGB2P05107 769 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 BPGMP07738 259 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 UQCRHP07919 91 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 ACPPP15309 386 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 HIST1H1TP22492 207 aaPredicted RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 JAK1P23458 1154 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 ATP5A1P25705 553 aaKnown RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 EFNA3P52797 238 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FOXA1P55317 472 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 RAB38P57729 211 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 MPP2Q14168 576 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 TUBB8Q3ZCM7 444 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 C10orf62Q5T681 223 aaPredicted RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 AGBL2Q5U5Z8 902 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 OR4C11Q6IEV9 310 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 SCIMPQ6UWF3 145 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 NUDCD3Q8IVD9 361 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 EFCAB3Q8N7B9 438 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 ACOT4Q8N9L9 421 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FAM47BQ8NA70 645 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 MGARPQ8TDB4 240 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 METTL21AQ8WXB1 218 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 TTC9Q92623 222 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 TSLPQ969D9 159 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 ARL8AQ96BM9 186 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 PAIP2Q9BPZ3 127 aaKnown RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 NPLQ9BXD5 320 aaPredicted RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 MRPL1Q9BYD6 325 aaKnown RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 CLK4Q9HAZ1 481 aaKnown RBP11.17□□□□□ -0.62
HPS4-214ENST00000485842 TNFRSF12AQ9NP84 129 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 LANCL2Q9NS86 450 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FBXL4Q9UKA2 621 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FBXW2Q9UKT8 454 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 FIS1Q9Y3D6 152 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 KCNMB2Q9Y691 235 aa11.17□□□□□ -0.62
HPS4-214ENST00000485842 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 ERVH48-1M5A8F1 160 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 ULK1O75385 1050 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 EEDO75530 441 aaKnown RBP11.16□□□□□ -0.62
HPS4-214ENST00000485842 C8orf89P0DMQ9 161 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 NEFHP12036 1026 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 IL10P22301 178 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 RRADP55042 308 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 LIM2P55344 173 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 POLE2P56282 527 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 CUL3Q13618 768 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 RCN2Q14257 317 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 LINC00303Q3SY05 128 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 HHATQ5VTY9 493 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 CLEC6AQ6EIG7 209 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 KIRREL2Q6UWL6 708 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 LANCL3Q6ZV70 420 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 CUZD1Q86UP6 607 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 NUDT13Q86X67 352 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 ADAMTS18Q8TE60 1221 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 VPS50Q96JG6 964 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 CNDP1Q96KN2 507 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 CSF3RQ99062 836 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 MAPKAP1Q9BPZ7 522 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 TRMOQ9BU70 441 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 TRIM55Q9BYV6 548 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 PPT2Q9UMR5 302 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 DAPP1Q9UN19 280 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 SPACA6W5XKT8 324 aa11.16□□□□□ -0.62
HPS4-214ENST00000485842 CFAP47Q6ZTR5 3102 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 H3BQF6 201 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 NPHS1O60500 1241 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 PRMT3O60678 531 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 SEMA3DO95025 777 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 SCELO95171 688 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 GBAP04062 536 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CHRNGP07510 517 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 FAM87AP0C7U9 286 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 HSD3B1P14060 373 aa11.15□□□□□ -0.62
HPS4-214ENST00000485842 CHN1P15882 459 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms