RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MS4A6EQ96DS6 147 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 TMEM79Q9BSE2 394 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CAPS2Q9BXY5 557 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 DERL2Q9GZP9 239 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CNOT10Q9H9A5 744 aaKnown RBP14.24□□□□□ -0.13
LIMS3-203ENST00000480744 COPS7BQ9H9Q2 264 aaPredicted RBP14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CHST11Q9NPF2 352 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 DNAJC11Q9NVH1 559 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF835Q9Y2P0 537 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 APCP25054 2843 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 LRIT2A6NDA9 550 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 CLDN4O14493 209 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 CDK2AP1O14519 115 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TFECO14948 347 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TAPBPO15533 448 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 S100BP04271 92 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TRHRP34981 398 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 MEOX1P50221 254 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 HNRNPFP52597 415 aaKnown RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF630Q2M218 657 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 XKR6Q5GH73 641 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 ADNP2Q6IQ32 1131 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TRIM40Q6P9F5 258 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 C3P1Q6ZMU1 363 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 Q6ZPB1 254 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 SCUBE1Q8IWY4 988 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 CYP4Z2PQ8N1L4 340 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TCAIMQ8N3R3 496 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TMEM156Q8N614 296 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 APCDD1LQ8NCL9 501 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TMEM52Q8NDY8 209 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 SREK1Q8WXA9 508 aaKnown RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 NCLNQ969V3 563 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 VMP1Q96GC9 406 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 CCDC77Q9BR77 488 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 MCMBPQ9BTE3 642 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 NPLQ9BXD5 320 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 REXO4Q9GZR2 422 aaKnown RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 NT5DC2Q9H857 520 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 GPRC5BQ9NZH0 403 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 CD274Q9NZQ7 290 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 MRPS33Q9Y291 106 aaKnown RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 KLF13Q9Y2Y9 288 aaPredicted RBP14.23□□□□□ -0.13
LIMS3-203ENST00000480744 MEMO1Q9Y316 297 aa14.23□□□□□ -0.13
LIMS3-203ENST00000480744 TGFBR3LH3BV60 316 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 ITGA10O75578 1167 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 CLEC3AO75596 197 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 IFNA16P05015 189 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 CD1DP15813 335 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 STMN1P16949 149 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 CERS1P27544 350 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 GSTM2P28161 218 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 PTGER1P34995 402 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 HSD17B7P56937 341 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 ILF2Q12905 390 aaKnown RBP14.22□□□□□ -0.13
LIMS3-203ENST00000480744 DOC2AQ14183 400 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 OR4D1Q15615 310 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 PDK4Q16654 411 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 SULT1C3Q6IMI6 304 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 SULF2Q8IWU5 870 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 CTAGE3PQ8IX95 158 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 OR2L5Q8NG80 312 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 ADAMTS18Q8TE60 1221 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 AGAP11Q8TF27 550 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 QRFPRQ96P65 431 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 RBBP8Q99708 897 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 TRIM45Q9H8W5 580 aaPredicted RBP14.22□□□□□ -0.13
LIMS3-203ENST00000480744 RNF14Q9UBS8 474 aa14.22□□□□□ -0.13
LIMS3-203ENST00000480744 MYOCOSA0A1B0GUC4 107 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 KLRC4-KLRK1H3BQV0 150 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 PRRG2O14669 202 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 PEX1O43933 1283 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 CDC40O60508 579 aaKnown RBP eCLIP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 CCNT2O60583 730 aaKnown RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 STK16O75716 305 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 WISP3O95389 354 aaPredicted RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 CASQ1P31415 396 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 SSR4P51571 173 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 MTTPP55157 894 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 GPR85P60893 370 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 ATP6V0D1P61421 351 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 TGM3Q08188 693 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 BMPR2Q13873 1038 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 TERF2Q15554 542 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 GDF7Q7Z4P5 450 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 VN1R5Q7Z5H4 357 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF595Q8IYB9 648 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 POGLUT1Q8NBL1 392 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 PTCD3Q96EY7 689 aaKnown RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 SEC16BQ96JE7 1060 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 PHF12Q96QT6 1004 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 F2RL3Q96RI0 385 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 SERINC2Q96SA4 455 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 CSF3RQ99062 836 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 GPR22Q99680 433 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 CPNE1Q99829 537 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 ERP44Q9BS26 406 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms