RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CBLBQ13191 982 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 ELAVL1Q15717 326 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 PDK4Q16654 411 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 SIAH3Q8IW03 269 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 SCUBE1Q8IWY4 988 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 SRRM1Q8IYB3 904 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 SNX31Q8N9S9 440 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 DAZLQ92904 295 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 MS4A6EQ96DS6 147 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 KCNC2Q96PR1 638 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 UNKQ9C0B0 810 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 NECTIN3Q9NQS3 549 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 PNO1Q9NRX1 252 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 COQ3Q9NZJ6 369 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 CD274Q9NZQ7 290 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 WHRNQ9P202 907 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 IKZF3Q9UKT9 509 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 PPIEQ9UNP9 301 aaKnown RBP13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 ERVK-11Q9UQG0 969 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 MEMO1Q9Y316 297 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 CLCA3PQ9Y6N3 262 aa13.5□□□□□ -0.25
SMARCE1-209ENST00000478349 ITPR2Q14571 2701 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 ABCA12Q86UK0 2595 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 LRIT2A6NDA9 550 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 A8MUA0 341 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 E9PLN8 166 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 ACOT7O00154 380 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 DYRK3O43781 588 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 MAN1A2O60476 641 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 ITGA10O75578 1167 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 ZFAND5O76080 213 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CLDN14O95500 239 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 TUBB4AP04350 444 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 IFNA16P05015 189 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CCDC166P0CW27 439 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 ELAVL4P26378 380 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 GGT5P36269 586 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 RPL21P46778 160 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 PGGT1BP53609 377 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 PLA2G16P53816 162 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CAV1Q03135 178 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 FASTKD3Q14CZ7 662 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 XKR6Q5GH73 641 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CAPN12Q6ZSI9 719 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CYS1Q717R9 158 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 LRRC70Q7Z2Q7 622 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CEP97Q8IW35 865 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 NFAM1Q8NET5 270 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 ANKRD49Q8WVL7 239 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 GPR22Q99680 433 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 VKORC1Q9BQB6 163 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CENPKQ9BS16 269 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 PHACTR1Q9C0D0 580 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 KLHL31Q9H511 634 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 RNF112Q9ULX5 631 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 YARS2Q9Y2Z4 477 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 SNX24Q9Y343 169 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 SVILO95425 2214 aa13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 DIDO1Q9BTC0 2240 aaKnown RBP13.49□□□□□ -0.25
SMARCE1-209ENST00000478349 CROCCQ5TZA2 2017 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 A8MVJ9 347 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 COX7A2P14406 83 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 HNRNPH1P31943 449 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 SPRP35270 261 aaPredicted RBP13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 GDF5P43026 501 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 MEOX1P50221 254 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 IRF8Q02556 426 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 STX4Q12846 297 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 BMPR2Q13873 1038 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 SERTAD2Q14140 314 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 ADPRMQ3LIE5 342 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 TMEM35AQ53FP2 167 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 CTAGE3PQ8IX95 158 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 SHISA5Q8N114 240 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 CPSF7Q8N684 471 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 FAM47BQ8NA70 645 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 OR14A16Q8NHC5 309 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 AGAP11Q8TF27 550 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 ASB15Q8WXK1 588 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 NCLNQ969V3 563 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 MTFMTQ96DP5 389 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 RBBP8Q99708 897 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 ERP44Q9BS26 406 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 HPF1Q9NWY4 346 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 COPS7AQ9UBW8 275 aa13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 UTP11Q9Y3A2 253 aaKnown RBP13.48□□□□□ -0.25
SMARCE1-209ENST00000478349 USP27XA6NNY8 438 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 PEX1O43933 1283 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 CCNT2O60583 730 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 DNAJB6O75190 326 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 SSTR2P30874 369 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 STX2P32856 288 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 PTGS2P35354 604 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 HSPA7P48741 367 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 RAB10P61026 200 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms