RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 VEGFDO43915 354 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 FARS2O95363 451 aaKnown RBP17.93■□□□□ 0.46
VARS2-209ENST00000477288 SHMT2P34897 504 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 TMEM80Q96HE8 168 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 MSLNLQ96KJ4 702 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 POLDIP3Q9BY77 421 aaKnown RBP17.93■□□□□ 0.46
VARS2-209ENST00000477288 CNTN5O94779 1100 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 HADHBP55084 474 aaKnown RBP17.93■□□□□ 0.46
VARS2-209ENST00000477288 SLC26A5P58743 744 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 GRHL2Q6ISB3 625 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 TMEM139Q8IV31 216 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 NSMAFQ92636 917 aa17.93■□□□□ 0.46
VARS2-209ENST00000477288 DNM1LO00429 736 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 AHSGP02765 367 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 SOX2P48431 317 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 MLLT6P55198 1093 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 LAPTM4AQ15012 233 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 HERC3Q15034 1050 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 ZNF431Q8TF32 576 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 TGM7Q96PF1 710 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 OR52B2Q96RD2 323 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 MAPKAP1Q9BPZ7 522 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 PCDHB16Q9NRJ7 776 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 DZANK1Q9NVP4 752 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 LAMTOR5O43504 91 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 XPNPEP2O43895 674 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 LEFTY1O75610 366 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 CHRM1P11229 460 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 SCNN1AP37088 669 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 SLC36A4Q6YBV0 504 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 COQ8AQ8NI60 647 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 C12orf43Q96C57 262 aaKnown RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 GPR174Q9BXC1 333 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 FTSJ1Q9UET6 329 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 WDR45Q9Y484 360 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 PROM1O43490 865 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 PAK4O96013 591 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 HLA-DPB1P04440 258 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 HSD3B1P14060 373 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 NPR2P20594 1047 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 EDNRBP24530 442 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 PMS2P3Q13401 168 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 MRPL49Q13405 166 aaKnown RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 ZER1Q7Z7L7 766 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 ZNF701Q9NV72 531 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 A0A1W2PP55 124 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 H7BY64 318 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 SCO2O43819 266 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 PRKACGP22612 351 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 POU6F2P78424 691 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 LRRC37A5PQ49AS3 106 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 FLYWCH1Q4VC44 716 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 ZNF648Q5T619 568 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 ERN2Q76MJ5 926 aaKnown RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 NPAS3Q8IXF0 933 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 LINC00471Q8N535 108 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 ASB9Q96DX5 294 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 PRAP1Q96NZ9 151 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 TMEM248Q9NWD8 314 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 KNDC1Q76NI1 1749 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 IFNA2P01563 188 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 FBLP22087 321 aaKnown RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 RPS21P63220 83 aaKnown RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 FOXK1P85037 733 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 C1orf61Q13536 156 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 RPS27LQ71UM5 84 aaKnown RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 PTCHD1Q96NR3 888 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 NECAB3Q96P71 396 aaPredicted RBP17.92■□□□□ 0.46
VARS2-209ENST00000477288 OR2M4Q96R27 311 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 TAS2R10Q9NYW0 307 aa17.92■□□□□ 0.46
VARS2-209ENST00000477288 TP53I11O14683 189 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 SFTPBP07988 381 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 ZNF517Q6ZMY9 492 aaPredicted RBP17.91■□□□□ 0.46
VARS2-209ENST00000477288 TMEM74Q96NL1 305 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 FN3KQ9H479 309 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 DNMT3AQ9Y6K1 912 aaPredicted RBP17.91■□□□□ 0.46
VARS2-209ENST00000477288 A0A0D9SEW6 157 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 OR6C74A6NCV1 312 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 RHOP08100 348 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 G6PDP11413 515 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 XRCC1P18887 633 aaPredicted RBP17.91■□□□□ 0.46
VARS2-209ENST00000477288 MAPK3P27361 379 aaPredicted RBP17.91■□□□□ 0.46
VARS2-209ENST00000477288 FNTBP49356 437 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 SNU13P55769 128 aaKnown RBP17.91■□□□□ 0.46
VARS2-209ENST00000477288 PTPRCAPQ14761 206 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 TXNRD3NBQ6F5E7 133 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 SCGB1C1Q8TD33 95 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 PADI2Q9Y2J8 665 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 IFT172Q9UG01 1749 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 TRAV6A0A075B6T7 132 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 CIB4A0PJX0 185 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 DLDP09622 509 aaKnown RBP17.91■□□□□ 0.46
VARS2-209ENST00000477288 PFKLP17858 780 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 FOXN2P32314 431 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 CHRFAM7AQ494W8 412 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 SMOQ99835 787 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 DERL2Q9GZP9 239 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 PIGRP01833 764 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 C8BP07358 591 aa17.91■□□□□ 0.46
VARS2-209ENST00000477288 ACSBG2Q5FVE4 666 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms