RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 C1DQ13901 141 aaKnown RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 BOP1Q14137 746 aaKnown RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 CTXN3Q4LDR2 81 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 SPOUT1Q5T280 376 aaKnown RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 FAM92BQ6ZTR7 304 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 KCTD20Q7Z5Y7 419 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 LRRTM3Q86VH5 581 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 NLGN4YQ8NFZ3 816 aaPredicted RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 AKAP1Q92667 903 aaKnown RBP eCLIP14.64□□□□□ -0.072e-8■■■□□ 18
CLSTN1-205ENST00000477264 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 GPR62Q9BZJ7 368 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 RDH14Q9HBH5 336 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 FZD3Q9NPG1 666 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 TLR8Q9NR97 1041 aaKnown RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 THSD1Q9NS62 852 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 MARCH5Q9NX47 278 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 FKBPLQ9UIM3 349 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 SERTM1A2A2V5 107 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 DRGXA6NNA5 263 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 ZAR1LA6NP61 321 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 PLD2O14939 933 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 SLC22A5O76082 557 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 CYP17A1P05093 508 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 RPS3P23396 243 aaKnown RBP eCLIP14.64□□□□□ -0.078e-13■■□□□ 13.1
CLSTN1-205ENST00000477264 CDKN1CP49918 316 aaPredicted RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 SPIBQ01892 262 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 SPHARQ15513 63 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 SGO1Q5FBB7 561 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 GALNT10Q86SR1 603 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 C9orf62Q8N4C0 152 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 IL17RCQ8NAC3 791 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 MDGA1Q8NFP4 955 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 LHFPL5Q8TAF8 219 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 FCRL1Q96LA6 429 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 TSSK3Q96PN8 268 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 C12orf4Q9NQ89 552 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 TMLHEQ9NVH6 421 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 NDUFAF4Q9P032 175 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 TNFRSF10DQ9UBN6 386 aa14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 MRPL42Q9Y6G3 142 aaKnown RBP14.64□□□□□ -0.07
CLSTN1-205ENST00000477264 VWA8A3KMH1 1905 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ZNF106Q9H2Y7 1883 aaKnown RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 LOC730098B7Z3J9 87 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 AKR7A2O43488 359 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 TPST2O60704 377 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CSF2P04141 144 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ACRP10323 421 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 EN2P19622 333 aaPredicted RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CBLP22681 906 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 DGKAP23743 735 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 SDC2P34741 201 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 C21orf58P58505 322 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 HOXC5Q00444 222 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 RGS1Q08116 209 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 IFI44LQ53G44 452 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CDKL4Q5MAI5 379 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 TMEM201Q5SNT2 666 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 PAMR1Q6UXH9 720 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CERS6Q6ZMG9 384 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 TMC8Q8IU68 726 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 KLHL6Q8WZ60 621 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 MARVELD1Q9BSK0 173 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 HDHD5Q9BXW7 423 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CHST8Q9H2A9 424 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 KCNN2Q9H2S1 579 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ZNF451Q9Y4E5 1061 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 PCDHB11Q9Y5F2 797 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 A0A1W2PQL4 384 aaPredicted RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 H3BM21 787 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 TNFRSF10BO14763 440 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CSO75390 466 aaKnown RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 OR4Q2P0C623 313 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 IFI30P13284 250 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 WDR5P61964 334 aaKnown RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 CACNG1Q06432 222 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 SMARCB1Q12824 385 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 RIN1Q13671 783 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 NCF4Q15080 339 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.63□□□□□ -0.072e-9■■■□□ 14.8
CLSTN1-205ENST00000477264 PTCHD4Q6ZW05 846 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ZNF557Q8N988 423 aaPredicted RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 FAM46DQ8NEK8 389 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 OR8J2Q8NGG1 315 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 VANGL1Q8TAA9 524 aaPredicted RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 SELENOMQ8WWX9 145 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 B3GNT4Q9C0J1 378 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 PIGUQ9H490 435 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 SLC25A19Q9HC21 320 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ABI2Q9NYB9 513 aaPredicted RBP14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 FTSJ1Q9UET6 329 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 SLC23A1Q9UHI7 598 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 ASB4Q9Y574 426 aa14.63□□□□□ -0.07
CLSTN1-205ENST00000477264 A0A1W2PQH9 124 aa14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 OR6C75A6NL08 312 aa14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 WASHC1A8K0Z3 465 aa14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 H7C4K7 107 aa14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 MEN1O00255 615 aa14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 SCAMP3O14828 347 aaKnown RBP14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 GJB3O75712 270 aa14.62□□□□□ -0.07
CLSTN1-205ENST00000477264 GUCA1CO95843 209 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms