RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 POPDC2Q9HBU9 364 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 GLOD4Q9HC38 313 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TMEM8AQ9HCN3 771 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 MRPL47Q9HD33 250 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 C6orf50Q9HD87 102 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 KRT84Q9NSB2 600 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SH3BP4Q9P0V3 963 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 GPR160Q9UJ42 338 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SSR3Q9UNL2 185 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SNED1Q8TER0 1413 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 hCG_1818297A0A087WSY0 165 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A0U1RQS6 177 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 RHPN2P1A8MT19 583 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 UBXN8O00124 270 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 DFFAO00273 331 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CACNB4O00305 520 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PPEF2O14830 753 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ARPC2O15144 300 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC16A6O15403 523 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 FABP7O15540 132 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 RAD1O60671 282 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PEX10O60683 326 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ANGPTL1O95841 491 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CSH1P0DML2 217 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CSH2P0DML3 217 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CKMT1AP12532 417 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 VEGFAP15692 232 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 RAB3BP20337 219 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 AGXTP21549 392 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ATP5A1P25705 553 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ACADLP28330 430 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 MAP2K4P45985 399 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CTSWP56202 376 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ERVK-25P63136 954 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ABATP80404 500 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 DMP1Q13316 513 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SNTB1Q13884 538 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TFDP2Q14188 446 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 IRF3Q14653 427 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 VEPH1Q14D04 833 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CBWD6Q4V339 395 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TFDP3Q5H9I0 405 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 OR2B11Q5JQS5 317 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CBWD3Q5JTY5 395 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CBWD5Q5RIA9 395 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 LIN9Q5TKA1 542 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TCEAL6Q6IPX3 200 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 RGS7BPQ6MZT1 257 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NOTUMQ6P988 496 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 C16orf54Q6UWD8 224 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TMPRSS11AQ6ZMR5 421 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 COPS6Q7L5N1 327 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ADGRD2Q7Z7M1 963 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 TAC4Q86UU9 113 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 DNAJC10Q8IXB1 793 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CENPLQ8N0S6 344 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 MS4A15Q8N5U1 240 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NLGN4YQ8NFZ3 816 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 OR8D4Q8NGM9 314 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 AKR7LQ8NHP1 331 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM110BQ8TC76 370 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 BPIFB1Q8TDL5 484 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 HGDQ93099 445 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NTAN1Q96AB6 310 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PEX11GQ96HA9 241 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NARS2Q96I59 477 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 MBOAT4Q96T53 435 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ACOX2Q99424 681 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ERVK-6Q9BXR3 956 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF768Q9H5H4 540 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SYNDIG1Q9H7V2 258 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 C19orf12Q9NSK7 152 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 PPP4R1LQ9P1A2 415 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 XPR1Q9UBH6 696 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 C3orf18Q9UK00 162 aa4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 CHTOPQ9Y3Y2 248 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 SAMHD1Q9Y3Z3 626 aaKnown RBP4.93□□□□□ -1.62
TMEM39A-206ENST00000473684 COL4A1P02462 1669 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PRAMEF25A6NGN4 478 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ASB14A6NK59 587 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TBX3O15119 743 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 GRID2O43424 1007 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TULP3O75386 442 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CYBBP04839 570 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PRKCGP05129 697 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 OR56A5P0C7T3 313 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ERVK-10P10266 1014 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 PDHA2P29803 388 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 ARL4AP40617 200 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 KIR2DL3P43628 341 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TGM4P49221 684 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 HNMTP50135 292 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 CLDN20P56880 219 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 TAS2R40P59535 323 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 FOXM1Q08050 763 aa4.92□□□□□ -1.62
TMEM39A-206ENST00000473684 GTF2H3Q13889 308 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms