RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TMEM151BQ8IW70 566 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 CA13Q8N1Q1 262 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ACOT4Q8N9L9 421 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 AHSPQ9NZD4 102 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 SLC12A4Q9UP95 1085 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ACACBO00763 2458 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 SERTM1A2A2V5 107 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 CDC14CA4D256 554 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 ITM2AO43736 263 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 JRKO75564 520 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 SEMA3DO95025 777 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 SCELO95171 688 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 HSPA4LO95757 839 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 UMODP07911 640 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 FGF4P08620 206 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 RNH1P13489 461 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 CHN1P15882 459 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 CERS1P27544 350 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 CDC20Q12834 499 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 STX3Q13277 289 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 IL10RAQ13651 578 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 UGT8Q16880 541 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 ATP1A1-AS1Q5TC04 95 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 HOMEZQ8IX15 550 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 CLYBLQ8N0X4 340 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 TBC1D20Q96BZ9 403 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 OR1F2PQ96R84 312 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 CRB3Q9BUF7 120 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 SORBS1Q9BX66 1292 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF717Q9BY31 904 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 MRPL1Q9BYD6 325 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 VPS29Q9UBQ0 182 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 C3orf18Q9UK00 162 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 FIS1Q9Y3D6 152 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 DMXL2Q8TDJ6 3036 aa13.65□□□□□ -0.22
DNMT3A-208ENST00000466601 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 CHEK2O96017 543 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 IGHEP01854 428 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 HEXBP07686 556 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 FURINP09958 794 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 OTX2P32243 289 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 BSGP35613 385 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 SLC1A6P48664 564 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 EMP2P54851 167 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 LIM2P55344 173 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 RAB38P57729 211 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 SLAMF1Q13291 335 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 SH2D4BQ5SQS7 431 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 MFSD4BQ5TF39 518 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 KANK2Q63ZY3 851 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 RAB43Q86YS6 212 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 TRIM42Q8IWZ5 723 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 METTL4Q8N3J2 472 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 AGR3Q8TD06 166 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 ADAMTS17Q8TE56 1095 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 SNRNP27Q8WVK2 155 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 CRELD1Q96HD1 420 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 RBCK1Q9BYM8 510 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 ACPTQ9BZG2 426 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 DDX31Q9H8H2 851 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 ZNF395Q9H8N7 513 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 LYRM4Q9HD34 91 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 SEMA3GQ9NS98 782 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 MKL2Q9ULH7 1088 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 DAPP1Q9UN19 280 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 CCDC88CQ9P219 2028 aa13.64□□□□□ -0.23
DNMT3A-208ENST00000466601 IDSB3KWA1 339 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 TMEM233B4DJY2 109 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 FAM227AF5H4B4 570 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 EEDO75530 441 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 CDC123O75794 336 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 SNUPNO95149 360 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 FHP07954 510 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 JAK1P23458 1154 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 MMP11P24347 488 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 BST1Q10588 318 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 TBL3Q12788 808 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 IMPG1Q17R60 797 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 COL28A1Q2UY09 1125 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 UGT3A2Q3SY77 523 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 TUBB8Q3ZCM7 444 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 MINDY4Q4G0A6 757 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 MED25Q71SY5 747 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 PAGE2Q7Z2X7 111 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 TRIM46Q7Z4K8 759 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 NUDT13Q86X67 352 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
DNMT3A-208ENST00000466601 ADAMTS18Q8TE60 1221 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms