RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.35□□□□□ -0.11
SKA3-204ENST00000462482 ZNF595Q8IYB9 648 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 KLHDC8AQ8IYD2 350 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 TCAIMQ8N3R3 496 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 APCDD1LQ8NCL9 501 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 ASB15Q8WXK1 588 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 NCLNQ969V3 563 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 TP63Q9H3D4 680 aaPredicted RBP14.35□□□□□ -0.11
SKA3-204ENST00000462482 ADAP2Q9NPF8 381 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 HPF1Q9NWY4 346 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 IKZF3Q9UKT9 509 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 TEX264Q9Y6I9 313 aa14.35□□□□□ -0.11
SKA3-204ENST00000462482 CPAMD8Q8IZJ3 1885 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 A0A0G2JN53 185 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 LRIT2A6NDA9 550 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 CLEC3AO75596 197 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 PLA2G16P53816 162 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 GPR85P60893 370 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 STX4Q12846 297 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 RUNX2Q13950 521 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 EFTUD2Q15029 972 aaKnown RBP eCLIP14.34□□□□□ -0.111e-8■■■■■ 36.9
SKA3-204ENST00000462482 CDSNQ15517 529 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 TSNQ15631 228 aaKnown RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 ELAVL1Q15717 326 aaKnown RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 SLCO4C1Q6ZQN7 724 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 CDH24Q86UP0 819 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 ZC3HC1Q86WB0 502 aaKnown RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 ANKMY2Q8IV38 441 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 CHERPQ8IWX8 916 aaKnown RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 SCUBE1Q8IWY4 988 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 KLHL7Q8IXQ5 586 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 FAM47BQ8NA70 645 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 ZFP62Q8NB50 900 aaPredicted RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 C16orf52Q8NHV5 167 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 RND1Q92730 232 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 DAZLQ92904 295 aaKnown RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 MS4A6EQ96DS6 147 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 TSPAN17Q96FV3 270 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 REXO4Q9GZR2 422 aaKnown RBP14.34□□□□□ -0.11
SKA3-204ENST00000462482 NT5DC2Q9H857 520 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 POPDC3Q9HBV1 291 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 MCCC2Q9HCC0 563 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 WWOXQ9NZC7 414 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 GPRC5BQ9NZH0 403 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 KCMF1Q9P0J7 381 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 TXNDC16Q9P2K2 825 aa14.34□□□□□ -0.11
SKA3-204ENST00000462482 CTAGE15A4D2H0 777 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 NCF1BA6NI72 391 aaPredicted RBP14.33□□□□□ -0.12
SKA3-204ENST00000462482 NCF1CA8MVU1 366 aaPredicted RBP14.33□□□□□ -0.12
SKA3-204ENST00000462482 FOXO6A8MYZ6 492 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 ADAM10O14672 748 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 PDE9AO76083 593 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 NCF1P14598 390 aaPredicted RBP14.33□□□□□ -0.12
SKA3-204ENST00000462482 TNNI3P19429 210 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 IVDP26440 423 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 CHRNB4P30926 498 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 GDF5P43026 501 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 MTTPP55157 894 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 TAS2R39P59534 338 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 PDIA2Q13087 525 aaKnown RBP14.33□□□□□ -0.12
SKA3-204ENST00000462482 ZNF460Q14592 562 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 HIST2H2ACQ16777 129 aaPredicted RBP14.33□□□□□ -0.12
SKA3-204ENST00000462482 CMPK2Q5EBM0 449 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 HIST2H2AA3Q6FI13 130 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 HSDL2Q6YN16 418 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 RGS9BPQ6ZS82 235 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 MDGA2Q7Z553 956 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 FGD2Q7Z6J4 655 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 CTAGE6Q86UF2 777 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 SNX31Q8N9S9 440 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 PSD4Q8NDX1 1056 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 C7orf57Q8NEG2 295 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 OR2L5Q8NG80 312 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 KIAA1191Q96A73 305 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 RHBDF1Q96CC6 855 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 PWWP2AQ96N64 755 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 SERINC2Q96SA4 455 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 ROGDIQ9GZN7 287 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 ENKD1Q9H0I2 346 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 PLAC1Q9HBJ0 212 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 KCNJ16Q9NPI9 418 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 DNAJC11Q9NVH1 559 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 PPIEQ9UNP9 301 aaKnown RBP14.33□□□□□ -0.12
SKA3-204ENST00000462482 SPACA6W5XKT8 324 aa14.33□□□□□ -0.12
SKA3-204ENST00000462482 HEATR5BQ9P2D3 2071 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 MYO7BQ6PIF6 2116 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 C4orf51C9J302 202 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 OR2J2O76002 312 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 S100BP04271 92 aaPredicted RBP14.32□□□□□ -0.12
SKA3-204ENST00000462482 HNRNPH1P31943 449 aaKnown RBP14.32□□□□□ -0.12
SKA3-204ENST00000462482 SLC6A12P48065 614 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 PPIAP62937 165 aaKnown RBP14.32□□□□□ -0.12
SKA3-204ENST00000462482 XKR6Q5GH73 641 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 PAGE2BQ5JRK9 111 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 IL20RBQ6UXL0 311 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 GK5Q6ZS86 529 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 CLNKQ7Z7G1 428 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 SLC22A16Q86VW1 577 aa14.32□□□□□ -0.12
SKA3-204ENST00000462482 GPSM1Q86YR5 675 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms