RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 PHF1O43189 567 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 TLX2O43763 284 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 OR1I1O60431 355 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 CST8O60676 142 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 ITGA10O75578 1167 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 EPPINO95925 133 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 SERPING1P05155 500 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FAM228BP0C875 321 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 PECAM1P16284 738 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 BMP5P22003 454 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 HRH2P25021 359 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 THBS2P35442 1172 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 PPARGP37231 505 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 MAN2A2P49641 1150 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 CSE1LP55060 971 aaKnown RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 GPR85P60893 370 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 PLGLB1Q02325 96 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 DMTNQ08495 405 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 TRIM14Q14142 442 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 SLBPQ14493 270 aaKnown RBP eCLIP6.77□□□□□ -1.33
RBM39-218ENST00000449489 SLC10A1Q14973 349 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 TMED2Q15363 201 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 TERF2Q15554 542 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 CCSMST1Q4G0I0 132 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 ODF2Q5BJF6 829 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 ICE2Q659A1 982 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 NIPAL1Q6NVV3 410 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 MFSD7Q6UXD7 560 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 QSOX2Q6ZRP7 698 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 ULK2Q8IYT8 1036 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 TMEM251Q8N6I4 163 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 APCDD1LQ8NCL9 501 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 GSDMBQ8TAX9 411 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FBLIM1Q8WUP2 373 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 TM4SF19Q96DZ7 209 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FOPNLQ96NB1 174 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 ALS2CR12Q96Q35 445 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 PANX2Q96RD6 677 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FAM173AQ9BQD7 235 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 APOL2Q9BQE5 337 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FERMT1Q9BQL6 677 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 HSD3B7Q9H2F3 369 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 KCNF1Q9H3M0 494 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 CLK4Q9HAZ1 481 aaKnown RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 ANKHQ9HCJ1 492 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 RIMKLBQ9ULI2 386 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 TTC7AQ9ULT0 858 aaPredicted RBP6.77□□□□□ -1.33
RBM39-218ENST00000449489 NENFQ9UMX5 172 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 PCDHA3Q9Y5H8 950 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 SLC22A7Q9Y694 548 aa6.77□□□□□ -1.33
RBM39-218ENST00000449489 FREM1Q5H8C1 2179 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 RAI1Q7Z5J4 1906 aaPredicted RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 TCRBV16S1A1N1A0A5B0 115 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 PINLYPA6NC86 204 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ZNF839A8K0R7 811 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 FAM166BA8MTA8 275 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 MYO1CO00159 1063 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 CLEC3AO75596 197 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ZNF189O75820 626 aaPredicted RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 SOX30O94993 753 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 MATN4O95460 622 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 IL18BPO95998 194 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 KRT1P04264 644 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 FHP07954 510 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 CNR1P21554 472 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 JAK1P23458 1154 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 RPA3P35244 121 aaPredicted RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 SLC1A1P43005 524 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 PCYT1AP49585 367 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 SSR4P51571 173 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 CLCN2P51788 898 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 RPS15AP62244 130 aaKnown RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 RNF4P78317 190 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 FOXO1Q12778 655 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 SF3B4Q15427 424 aaKnown RBP eCLIP6.76□□□□□ -1.332e-62■■■■■ 60.3
RBM39-218ENST00000449489 ACKR1Q16570 336 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ANKRD20A4Q4UJ75 823 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ANKRD20A2Q5SQ80 823 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ANKRD20A1Q5TYW2 823 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ANKRD20A3Q5VUR7 823 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 PRSS41Q7RTY9 318 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 VN1R4Q7Z5H5 301 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 LACC1Q8IV20 430 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 SHISA5Q8N114 240 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 CAMKVQ8NCB2 501 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 NAXEQ8NCW5 288 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 OR9A1PQ8NGU1 263 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 PPP1R14CQ8TAE6 165 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 LINC01560Q8TB33 94 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 CTNNBL1Q8WYA6 563 aaPredicted RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 TSLPQ969D9 159 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ZNF669Q96BR6 464 aaPredicted RBP6.76□□□□□ -1.33
RBM39-218ENST00000449489 TBC1D20Q96BZ9 403 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 SGCZQ96LD1 299 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 PANX3Q96QZ0 392 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 ACAT2Q9BWD1 397 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 NUP62CLQ9H1M0 184 aa6.76□□□□□ -1.33
RBM39-218ENST00000449489 HCN3Q9P1Z3 774 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms