RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	CLEC4A	Q9UMR7	237 aa		12.04	□□□□□ -0.48
DDR1-238	ENST00000446312	MAU2	Q9Y6X3	613 aa		12.04	□□□□□ -0.48
DDR1-238	ENST00000446312	AMD1	P17707	334 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	PRKAG1	P54619	331 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	GPLD1	P80108	840 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	FAM124A	Q86V42	546 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	SYT14	Q8NB59	555 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	GRPEL2	Q8TAA5	225 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	CCDC115	Q96NT0	180 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	FAM129B	Q96TA1	746 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	SYT17	Q9BSW7	474 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	MARCH5	Q9NX47	278 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	CLCA3P	Q9Y6N3	262 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	EFCAB10	A6NFE3	127 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	TRIM64B	A6NI03	449 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	CEP290	O15078	2479 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	HYAL3	O43820	417 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	C9	P02748	559 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	RPLP0	P05388	317 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	AOAH	P28039	575 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	NRIP1	P48552	1158 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	HOXC5	Q00444	222 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	RHAG	Q02094	409 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	BAK1	Q16611	211 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	PLEKHG6	Q3KR16	790 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	TTLL9	Q3SXZ7	439 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	PRSS48	Q7RTY5	328 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	CYB5D2	Q8WUJ1	264 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.03	□□□□□ -0.48	1e-7	■■■■□ 23.7
DDR1-238	ENST00000446312	TP53INP1	Q96A56	240 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	TRMT61A	Q96FX7	289 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	YME1L1	Q96TA2	773 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	MGLL	Q99685	303 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	MACROD1	Q9BQ69	325 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	ABCG4	Q9H172	646 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	AP3M1	Q9Y2T2	418 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	CHD5	Q8TDI0	1954 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	PRAMEF33	A0A0G2JMD5	474 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	PRAMEF25	A6NGN4	478 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	NRG2	O14511	850 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	WNT9A	O14904	365 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	PRAMEF10	O60809	474 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	NPPA	P01160	153 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	TP53	P04637	393 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	SPAM1	P38567	509 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	HBA1	P69905	142 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	GPR17	Q13304	367 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	TBRG1	Q3YBR2	411 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	EIF3M	Q7L2H7	374 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	KCTD20	Q7Z5Y7	419 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	WRAP53	Q9BUR4	548 aa	Known RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	C1QTNF3	Q9BXJ4	246 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	SERHL2	Q9H4I8	314 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	ZNF556	Q9HAH1	456 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	POLM	Q9NP87	494 aa	Predicted RBP	12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	ZNF226	Q9NYT6	803 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	OSGIN1	Q9UJX0	560 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	TMCC3	Q9ULS5	477 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	SH2B3	Q9UQQ2	575 aa		12.03	□□□□□ -0.48
DDR1-238	ENST00000446312	ARID1A	O14497	2285 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	TRBV5-3	A0A0A0MS03	114 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	ANKDD1B	A6NHY2	528 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	CPNE3	O75131	537 aa	Known RBP	12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	ZNF254	O75437	659 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	OR7A10	O76100	309 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	CH25H	O95992	272 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	UQCRC1	P31930	480 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	TNFSF8	P32971	234 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	SNTA1	Q13424	505 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	INSL4	Q14641	139 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	SYTL3	Q4VX76	610 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	C10orf62	Q5T681	223 aa	Predicted RBP	12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	IRAK1BP1	Q5VVH5	260 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	WDR48	Q8TAF3	677 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	PHF10	Q8WUB8	498 aa	Known RBP	12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	WFDC6	Q9BQY6	131 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	RANGRF	Q9HD47	186 aa	Predicted RBP	12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	ATP13A2	Q9NQ11	1180 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	DNAJC11	Q9NVH1	559 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	NDUFAF4	Q9P032	175 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	VPS29	Q9UBQ0	182 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	RPS6KA6	Q9UK32	745 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	GPR52	Q9Y2T5	361 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	SNX11	Q9Y5W9	270 aa		12.02	□□□□□ -0.48
DDR1-238	ENST00000446312	SCN2A	Q99250	2005 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	FAM25A	B3EWG3	89 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	FAM25C	B3EWG5	89 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	FAM25G	B3EWG6	89 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	OR10H3	O60404	316 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	GPX5	O75715	221 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	SLC16A8	O95907	504 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	ICAM2	P13598	275 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	SLC15A1	P46059	708 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	RGS6	P49758	472 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	CLCN4	P51793	760 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	PTPN5	P54829	565 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	WNT3	P56703	355 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	MLLT1	Q03111	559 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	ELP6	Q0PNE2	266 aa		12.02	□□□□□ -0.49

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