RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 DUSP12Q9UNI6 340 aa14.56□□□□□ -0.08
CHFR-204ENST00000443047 PCDHB9Q9Y5E1 797 aa14.56□□□□□ -0.08
CHFR-204ENST00000443047 TNPO3Q9Y5L0 923 aaKnown RBP14.56□□□□□ -0.08
CHFR-204ENST00000443047 DOCK6Q96HP0 2047 aa14.56□□□□□ -0.08
CHFR-204ENST00000443047 LINC00862A6NCI5 91 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 CR2P20023 1033 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 MAP2K6P52564 334 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 SMAD3P84022 425 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 TEKQ02763 1124 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 ELAVL2Q12926 359 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 DOK6Q6PKX4 331 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 CCDC149Q6ZUS6 474 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 LIX1LQ8IVB5 337 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 LIX1Q8N485 282 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 ARL14EPQ8N8R7 260 aaPredicted RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 KIAA1191Q96A73 305 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 FUBP1Q96AE4 644 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 HRASLS5Q96KN8 279 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 HYLS1Q96M11 299 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 NLE1Q9NVX2 485 aaPredicted RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 RDH8Q9NYR8 311 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 NDRG2Q9UN36 371 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 RFPL3O75679 317 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 IFNA16P05015 189 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 RPS17P08708 135 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 ADRA2AP08913 450 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 INPP1P49441 399 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 SMSP52788 366 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 GPR68Q15743 365 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 LCN1P1Q5VSP4 162 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 LRRC66Q68CR7 880 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 EIF3MQ7L2H7 374 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 RHEBL1Q8TAI7 183 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 IGSF21Q96ID5 467 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 FEVQ99581 238 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 YIPF1Q9Y548 306 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 CLDN11O75508 207 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 F11P03951 625 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 GJA1P17302 382 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 KELP23276 732 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 B2MP61769 119 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 RRAS2P62070 204 aaPredicted RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 HNRNPA0Q13151 305 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 LARS2Q15031 903 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 ADGRF1Q5T601 910 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 TIGD3Q6B0B8 471 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 ATCAYQ86WG3 371 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 EEF1AKMT1Q8WVE0 214 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 EID2BQ96D98 161 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 UQCC2Q9BRT2 126 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 CWH43Q9H720 699 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 HEBP1Q9NRV9 189 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 CPNE7Q9UBL6 633 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 SAMD4AQ9UPU9 718 aaKnown RBP14.55□□□□□ -0.08
CHFR-204ENST00000443047 VPS9D1Q9Y2B5 631 aa14.55□□□□□ -0.08
CHFR-204ENST00000443047 CHD5Q8TDI0 1954 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 ANKRD66B4E2M5 251 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 NRG2O14511 850 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 PRRG1O14668 218 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 BNIP3LO60238 219 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 EPOP01588 193 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 ETV1P50549 477 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 CSTF3Q12996 717 aaKnown RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 SHEQ5VZ18 495 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 TTLQ8NG68 377 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 UPRTQ96BW1 309 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 DPH2Q9BQC3 489 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 PPA2Q9H2U2 334 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 SPNS1Q9H2V7 528 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 FARSBQ9NSD9 589 aaKnown RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 CLEC4EQ9ULY5 219 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 C2orf81A6NN90 581 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 SMAD6O43541 496 aaKnown RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 LRATO95237 230 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 HOXD4P09016 255 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 SLC2A2P11168 524 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 ARSBP15848 533 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 POU1F1P28069 291 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 SLC14A1Q13336 389 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 SNAPC1Q16533 368 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 METTL2BQ6P1Q9 378 aaKnown RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 CHMP1BQ7LBR1 199 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 GDPD1Q8N9F7 314 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 GPR150Q8NGU9 434 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 ZNF461Q8TAF7 563 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 MARVELD3Q96A59 401 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 HSH2DQ96JZ2 352 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 MS4A7Q9GZW8 240 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 ZNF334Q9HCZ1 680 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 PAK6Q9NQU5 681 aaPredicted RBP14.54□□□□□ -0.08
CHFR-204ENST00000443047 COMMD3Q9UBI1 195 aa14.54□□□□□ -0.08
CHFR-204ENST00000443047 RANBP2P49792 3224 aaKnown RBP14.53□□□□□ -0.08
CHFR-204ENST00000443047 A0A1B0GVM2 712 aa14.53□□□□□ -0.08
CHFR-204ENST00000443047 VPS26AO75436 327 aa14.53□□□□□ -0.08
CHFR-204ENST00000443047 B3GALNT1O75752 331 aa14.53□□□□□ -0.08
CHFR-204ENST00000443047 CAV3P56539 151 aa14.53□□□□□ -0.08
CHFR-204ENST00000443047 CTSL3PQ5NE16 218 aa14.53□□□□□ -0.08
CHFR-204ENST00000443047 DNAJB7Q7Z6W7 309 aaPredicted RBP14.53□□□□□ -0.08
CHFR-204ENST00000443047 TMEM150AQ86TG1 271 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms