RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CREB3L4Q8TEY5 395 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 NLKQ9UBE8 527 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 SEC14L4Q9UDX3 406 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 STUB1Q9UNE7 303 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 SSR3Q9UNL2 185 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 IQCMA0A1B0GVH7 501 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 B8ZZF3 427 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 PRAMEF4O60810 478 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 C1QBP02746 253 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 HBQ1P09105 142 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 IRF1P10914 325 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 CPN2P22792 545 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 ITPKAP23677 461 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 APEX1P27695 318 aaKnown RBP19.44■□□□□ 0.7
SHOX2-203ENST00000441443 ARHGEF6Q15052 776 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 PRAMEF9Q5VWM5 478 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 C22orf42Q6IC83 251 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 MCUBQ9NWR8 336 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 KLHL21Q9UJP4 597 aa19.44■□□□□ 0.7
SHOX2-203ENST00000441443 LSM2Q9Y333 95 aaKnown RBP19.44■□□□□ 0.7
SHOX2-203ENST00000441443 LRRTM2O43300 516 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 EOMESO95936 686 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 GASTP01350 101 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 IGFBP1P08833 259 aaPredicted RBP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 RAB25P57735 213 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 TEKQ02763 1124 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 TOR2AQ5JU69 321 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 COX20Q5RI15 118 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 GPRC6AQ5T6X5 926 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 WDR53Q7Z5U6 358 aaPredicted RBP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 RBFAQ8N0V3 343 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 CHST8Q9H2A9 424 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 PCDH10Q9P2E7 1040 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 LRFN2Q9ULH4 789 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 KCNE1BA0A087WTH5 132 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 TNFRSF21O75509 655 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 ETFAP13804 333 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 CAV3P56539 151 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 IFI44LQ53G44 452 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 KLHL17Q6TDP4 642 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 TMIGD1Q6UXZ0 262 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 MSANTD1Q6ZTZ1 278 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 FAM181AQ8N9Y4 354 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 C11orf65Q8NCR3 313 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 BTN2A2Q8WVV5 523 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 PIH1D2Q8WWB5 315 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 SLC25A46Q96AG3 418 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 FUBP3Q96I24 572 aaKnown RBP eCLIP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 MTERF1Q99551 399 aaKnown RBP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 TRIM45Q9H8W5 580 aaPredicted RBP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 PLEKHB1Q9UF11 243 aaPredicted RBP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 PCDHB7Q9Y5E2 793 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 PIKFYVEQ9Y2I7 2098 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 HYKKA2RU49 373 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 MTMR11A4FU01 709 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 KDELR3O43731 214 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 RPLP2P05387 115 aaKnown RBP19.43■□□□□ 0.7
SHOX2-203ENST00000441443 M6PRP20645 277 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 NUDT1P36639 197 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 SP3Q02447 781 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 ZNF852Q6ZMS4 543 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 LIX1LQ8IVB5 337 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 LSMEM1Q8N8F7 131 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 RAET1EQ8TD07 263 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 DUSP26Q9BV47 211 aa19.43■□□□□ 0.7
SHOX2-203ENST00000441443 SH3D21A4FU49 640 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 GAPDHSO14556 408 aaPredicted RBP19.42■□□□□ 0.7
SHOX2-203ENST00000441443 SOX14O95416 240 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 TRBC1P01850 177 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 MSL3P1P0C860 447 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 CSTF2P33240 577 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHOX2-203ENST00000441443 SLC11A1P49279 550 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 RHAGQ02094 409 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 CERS6Q6ZMG9 384 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 IDO2Q6ZQW0 420 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 ZNF767PQ75MW2 155 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 GDPD1Q8N9F7 314 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 OR8H1Q8NGG4 311 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 OR6K2Q8NGY2 324 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 CD99L2Q8TCZ2 262 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 CSGALNACT1Q8TDX6 532 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 ACER3Q9NUN7 267 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 SLC22A14Q9Y267 594 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 YARS2Q9Y2Z4 477 aaKnown RBP19.42■□□□□ 0.7
SHOX2-203ENST00000441443 ADAM12O43184 909 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 MAP2K3P46734 347 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 SGSHP51688 502 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 FRG2Q64ET8 278 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 FRMPD2BQ6IN97 320 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 FRG2BQ96QU4 278 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 TXNL4BQ9NX01 149 aaKnown RBP19.42■□□□□ 0.7
SHOX2-203ENST00000441443 FAM120CQ9NX05 1096 aaKnown RBP19.42■□□□□ 0.7
SHOX2-203ENST00000441443 MAPRE3Q9UPY8 281 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 HCN4Q9Y3Q4 1203 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 SNX11Q9Y5W9 270 aa19.42■□□□□ 0.7
SHOX2-203ENST00000441443 PCGF2P35227 344 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 CRISP1P54107 249 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 PXDC1Q5TGL8 231 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 LCN1P1Q5VSP4 162 aa19.41■□□□□ 0.7
SHOX2-203ENST00000441443 CREB3L2Q70SY1 520 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms