RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 MMP2P08253 660 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 PKMP14618 531 aaKnown RBP13.18□□□□□ -0.3
LINC02048-201ENST00000440556 HSPA7P48741 367 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 GPR85P60893 370 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 MXD1Q05195 221 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 IL18Q14116 193 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 DSG2Q14126 1118 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 TEAD4Q15561 434 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 LGALSLQ3ZCW2 172 aaPredicted RBP13.18□□□□□ -0.3
LINC02048-201ENST00000440556 PLK5Q496M5 336 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 SUSD1Q6UWL2 747 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 LGI4Q8N135 537 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 TEX26Q8N6G2 289 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 PNPLA1Q8N8W4 532 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 UXS1Q8NBZ7 420 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 RIT1Q92963 219 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 LINGO1Q96FE5 620 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 TPD52L3Q96J77 140 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 FOPNLQ96NB1 174 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 NELL2Q99435 816 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 INPP5KQ9BT40 448 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 NLE1Q9NVX2 485 aaPredicted RBP13.18□□□□□ -0.3
LINC02048-201ENST00000440556 EMC3Q9P0I2 261 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 COPS3Q9UNS2 423 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 KCTD3Q9Y597 815 aa13.18□□□□□ -0.3
LINC02048-201ENST00000440556 LOC102723532A0A0G2JNH3 316 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 YKT6O15498 198 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PEX11BO96011 259 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 IGHA2P01877 340 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 EBLN1P0CF75 366 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ENGP17813 658 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ZNF81P51508 661 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 CLCN4P51793 760 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 RAG2P55895 527 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 BACE1P56817 501 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ZMYND11Q15326 602 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 SNAPC1Q16533 368 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PLA1AQ53H76 456 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ZNF57Q68EA5 555 aaPredicted RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ALKAL1Q6UXT8 129 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 TAC4Q86UU9 113 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 MS4A15Q8N5U1 240 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 LINC01465Q8N7H1 131 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 CLRN3Q8NCR9 226 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 TRIB3Q96RU7 358 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 COPZ2Q9P299 210 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 FAM8A1Q9UBU6 413 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PFDN2Q9UHV9 154 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 MEIKINA0A087WXM9 373 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 A8MXK9 166 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 M0R233 179 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 MANBAO00462 879 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 CLDN5O00501 218 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PRMT3O60678 531 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 MPC2O95563 127 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 GLUD1P00367 558 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 USP17L7P0C7H9 530 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 CTPS1P17812 591 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PRPH2P23942 346 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PSMA3P25788 255 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 FGF9P31371 208 aaPredicted RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 CRISP1P54107 249 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 SELENOWP63302 87 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 SRSF11Q05519 484 aaKnown RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 DGKZQ13574 1117 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 TUSC1Q2TAM9 212 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 OR2T4Q8NH00 348 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 WBP1Q96G27 269 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 LINC00052Q96N35 136 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 NTMT1Q9BV86 223 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 OR51J1Q9H342 316 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 HPF1Q9NWY4 346 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 UXTQ9UBK9 157 aaPredicted RBP13.17□□□□□ -0.3
LINC02048-201ENST00000440556 FTSJ1Q9UET6 329 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 AKT3Q9Y243 479 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 ASB1Q9Y576 335 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 PTCH2Q9Y6C5 1203 aa13.17□□□□□ -0.3
LINC02048-201ENST00000440556 IRGMA1A4Y4 181 aa13.16□□□□□ -0.3
LINC02048-201ENST00000440556 CBX4O00257 560 aa13.16□□□□□ -0.3
LINC02048-201ENST00000440556 FPGTO14772 594 aa13.16□□□□□ -0.3
LINC02048-201ENST00000440556 DDNO94850 711 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms